RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ZNF423Q2M1K9 1284 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 SPON1Q9HCB6 807 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ERAP1Q9NZ08 941 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 MTF2Q9Y483 593 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-202ENST00000339570 E7ENX8 843 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 AKAP10O43572 662 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 TFPTP0C1Z6 253 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 NCAM1P13591 858 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 PPARGP37231 505 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-202ENST00000339570 RGS2P41220 211 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 CLEC6AQ6EIG7 209 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 RHOBTB2Q9BYZ6 727 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 DDIT4Q9NX09 232 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 EGFL7Q9UHF1 273 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 FZD10Q9ULW2 581 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 PDLIM1O00151 329 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 GRID2O43424 1007 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 GPC4O75487 556 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 TNFAIP8O95379 198 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 STAMBPO95630 424 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 HNRNPCP07910 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARB1-202ENST00000339570 MAGEA6P43360 314 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 STT3AP46977 705 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 PLOD1Q02809 727 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-202ENST00000339570 STEAP4Q687X5 459 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 ITPRIPL1Q6GPH6 555 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 ARHGAP36Q6ZRI8 547 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 ADGRG6Q86SQ4 1221 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 LCA5Q86VQ0 697 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 MIPOL1Q8TD10 442 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 SLC29A1Q99808 456 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 FBRSL1Q9HCM7 1045 aaKnown RBP16.38■□□□□ 0.21
SCARB1-202ENST00000339570 HSFX1Q9UBD0 423 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-202ENST00000339570 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
SCARB1-202ENST00000339570 IGKV6-21A0A0C4DH24 114 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 C7orf72A4D263 438 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 MATN2O00339 956 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 LGALS2P05162 132 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 PAN2Q504Q3 1202 aaKnown RBP16.37■□□□□ 0.21
SCARB1-202ENST00000339570 ARHGAP17Q68EM7 881 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 CEP97Q8IW35 865 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 EFCAB1Q9HAE3 211 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 EPS15L1Q9UBC2 864 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 FAF1Q9UNN5 650 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-202ENST00000339570 ZCWPW2A0A1B0GU75 182 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 SMIM31A0A1B0GVY4 71 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 DLX3O60479 287 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 RECQL4O94761 1208 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 SLC5A2P31639 672 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 ADCYAP1R1P41586 468 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 CASP2P42575 452 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 BCAT1P54687 386 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 TRIM67Q6ZTA4 783 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 PSTKQ8IV42 348 aaKnown RBP16.37■□□□□ 0.21
SCARB1-202ENST00000339570 APBB2Q92870 758 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 POMKQ9H5K3 350 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 OXSMQ9NWU1 459 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 RIMS3Q9UJD0 308 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 NFKBIEO00221 500 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 DPYSL4O14531 572 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 NRP1O14786 923 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 USP17L7P0C7H9 530 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 PPIDQ08752 370 aaKnown RBP16.37■□□□□ 0.21
SCARB1-202ENST00000339570 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
SCARB1-202ENST00000339570 SPANXN3Q5MJ09 141 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 C6orf203Q9P0P8 240 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-202ENST00000339570 RAP2CQ9Y3L5 183 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 PTGDR2Q9Y5Y4 395 aa16.37■□□□□ 0.21
SCARB1-202ENST00000339570 FER1L6Q2WGJ9 1857 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 TTC24A2A3L6 582 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-202ENST00000339570 SLC4A1P02730 911 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 AHSGP02765 367 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 GLDCP23378 1020 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 YWHAQP27348 245 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 MATKP42679 507 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 CHRNA4P43681 627 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 TKTL1P51854 596 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 GRM2Q14416 872 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 PIGGQ5H8A4 983 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 ESRP1Q6NXG1 681 aaKnown RBP16.36■□□□□ 0.21
SCARB1-202ENST00000339570 SLC26A9Q7LBE3 791 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 ZNF354CQ86Y25 554 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 ZNF786Q8N393 782 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 TSPAN14Q8NG11 270 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 KBTBD7Q8WVZ9 684 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 LPGAT1Q92604 370 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 EMID1Q96A84 441 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-202ENST00000339570 MLPHQ9BV36 600 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-202ENST00000339570 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 TGFB3P10600 412 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 SLC12A2P55011 1212 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 PSME3P61289 254 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 DBN1Q16643 649 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 MAP7D1Q3KQU3 841 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 LPCAT2Q7L5N7 544 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 CHST15Q7LFX5 561 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms