RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 MAPK11Q15759 364 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 PERM1Q5SV97 790 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 FRA10AC1Q70Z53 315 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 TTC30AQ86WT1 665 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 PLD3Q8IV08 490 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 CASP10Q92851 521 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 QKIQ96PU8 341 aaKnown RBP eCLIP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 KCTD14Q9BQ13 255 aaPredicted RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 DDX28Q9NUL7 540 aaKnown RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 UBQLN1Q9UMX0 589 aaKnown RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 DHRS12A0PJE2 317 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 MAN1A2O60476 641 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 MGEA5O60502 916 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.391e-9■□□□□ 8.7
RIOK3-201ENST00000339486 TRIM25Q14258 630 aaKnown RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 PITRM1Q5JRX3 1037 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 KIAA0319LQ8IZA0 1049 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 NDRG1Q92597 394 aaKnown RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 SETD4Q9NVD3 440 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 SLC8A2Q9UPR5 921 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
RIOK3-201ENST00000339486 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 NCAM2O15394 837 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 TTKP33981 857 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 GEMP55040 296 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 DPYSQ14117 519 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 MYLK3Q32MK0 819 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 TAF2Q6P1X5 1199 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 B3GNT9Q6UX72 402 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 ZNF410Q86VK4 478 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 ZFP28Q8NHY6 868 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 OLIG1Q8TAK6 271 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 DNAJB14Q8TBM8 379 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 MOCOSQ96EN8 888 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 USP29Q9HBJ7 922 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 MID1IP1Q9NPA3 183 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 RBM22Q9NW64 420 aaKnown RBP eCLIP12.63□□□□□ -0.393e-9■■■■■ 38.6
RIOK3-201ENST00000339486 CIDEBQ9UHD4 219 aa12.63□□□□□ -0.39
RIOK3-201ENST00000339486 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■■■ 72.3
RIOK3-201ENST00000339486 NCF1BA6NI72 391 aaPredicted RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 NCF1CA8MVU1 366 aaPredicted RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 NRP2O60462 931 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 NCF1P14598 390 aaPredicted RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 SQLEQ14534 574 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 PLCL1Q15111 1095 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 RGS21Q2M5E4 152 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 FKBP1CQ5VVH2 108 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 TMEM192Q8IY95 271 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CCDC185Q8N715 623 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 GLMNQ92990 594 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 THUMPD3Q9BV44 507 aaKnown RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 OSBPL6Q9BZF3 934 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CXorf21Q9HAI6 301 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 TRHDEQ9UKU6 1024 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 HES2Q9Y543 173 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 MYO18AQ92614 2054 aaKnown RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 H3BNX3 289 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 MDM4O15151 490 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 ALDOAP04075 364 aaKnown RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 HOXC6P09630 235 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 TGFB3P10600 412 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 ADORA2AP29274 412 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CDH13P55290 713 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 RAB10P61026 200 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CDK18Q07002 472 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 SEMA5AQ13591 1074 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 TAF12Q16514 161 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 NEPROQ6NW34 567 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 ABRAXAS1Q6UWZ7 409 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 PIGZQ86VD9 579 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CNTD1Q8N815 330 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 REPS2Q8NFH8 660 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 NXNL1Q96CM4 212 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CEP19Q96LK0 163 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 DHRS4Q9BTZ2 278 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 SQORQ9Y6N5 450 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 GPR25O00155 361 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 DNAJA2O60884 412 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 LTFP02788 710 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 AKAP5P24588 427 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 CLK1P49759 484 aaKnown RBP12.62□□□□□ -0.39
RIOK3-201ENST00000339486 IMPG1Q17R60 797 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 ZNF567Q8N184 647 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 COPS5Q92905 334 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 BORCS5Q969J3 196 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 NSMCE2Q96MF7 247 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 BDH2Q9BUT1 245 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 RHOJQ9H4E5 214 aa12.62□□□□□ -0.39
RIOK3-201ENST00000339486 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
RIOK3-201ENST00000339486 C9JVG2 144 aa12.61□□□□□ -0.39
RIOK3-201ENST00000339486 E5RI56 91 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms