RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KLF16Q9BXK1 252 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 IL22Q9GZX6 179 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 PSMD3O43242 534 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 CXCL14O95715 111 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 CD86P42081 329 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 GEMP55040 296 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 FPGSQ05932 587 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 MGAT5Q09328 741 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 IHHQ14623 411 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 SEPT7Q16181 437 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 PARP15Q460N3 678 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 GKAP1Q5VSY0 366 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 CDHR3Q6ZTQ4 885 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 MARK2Q7KZI7 788 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 ARL14EPQ8N8R7 260 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 OR7D4Q8NG98 312 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 PLD4Q96BZ4 506 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 AGAP2Q99490 1192 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 SLC13A1Q9BZW2 595 aa22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.8■■□□□ 1.24
PDLIM2-203ENST00000339162 BPTFQ12830 3046 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 ZWINTO95229 277 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 F11P03951 625 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 TAC1P20366 129 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 ADRA1AP35348 466 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 MAPKAPK2P49137 400 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 SLC18A2Q05940 514 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 ACBD5Q5T8D3 534 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 PACS1Q6VY07 963 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 PGBD5Q8N414 524 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 ALKBH8Q96BT7 664 aaKnown RBP22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 RXFP1Q9HBX9 757 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 CHD7Q9P2D1 2997 aa22.79■■□□□ 1.24
PDLIM2-203ENST00000339162 USP1O94782 785 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 HSPA1AP0DMV8 641 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 HSPA1BP0DMV9 641 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 ZXDBP98169 803 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 PPIGQ13427 754 aaKnown RBP eCLIP22.78■■□□□ 1.241e-8■■■□□ 18.4
PDLIM2-203ENST00000339162 HSP90AA5PQ58FG0 334 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 FAM47EQ6ZV65 393 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 SLC25A41Q8N5S1 370 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 APOPT1Q96IL0 206 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 SLC25A51Q9H1U9 297 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 IL21Q9HBE4 155 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 INSL6Q9Y581 213 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 FAM169AQ9Y6X4 670 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 FAM237BA0A1B0GVD1 139 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 H3BNC9 293 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 SYN1P17600 705 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 WNT3AP56704 352 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 SMAD3P84022 425 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 CYP4F8P98187 520 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 IL10RBQ08334 325 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 DNAJC3Q13217 504 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 C5orf22Q49AR2 442 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 HS6ST3Q8IZP7 471 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 NSMCE1Q8WV22 266 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 AZIN2Q96A70 460 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 ATXN7L3BQ96GX2 97 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 ZFRQ96KR1 1074 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 FAM111AQ96PZ2 611 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 SPON2Q9BUD6 331 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 SOX13Q9UN79 622 aa22.78■■□□□ 1.24
PDLIM2-203ENST00000339162 TOP3BO95985 862 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 GLDCP23378 1020 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 YBEYP58557 167 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 ERVFC1P60507 584 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 MTA1Q13330 715 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 TMEM240Q5SV17 173 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 ADGRF1Q5T601 910 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 IL31Q6EBC2 164 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 ATP2A3Q93084 1043 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 IMP4Q96G21 291 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 C20orf96Q9NUD7 363 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 PCMTD2Q9NV79 361 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 UXTQ9UBK9 157 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 ANAPC1Q9H1A4 1944 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 NRG2O14511 850 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 COPEO14579 308 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 GABRR2P28476 465 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 ABCG1P45844 678 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 NEK3P51956 506 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 GNA12Q03113 381 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 LBRQ14739 615 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 RABGAP1LQ5R372 815 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 RANBP10Q6VN20 620 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 CACNA2D3Q8IZS8 1091 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 CLP1Q92989 425 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 SRPK1Q96SB4 655 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 TCF25Q9BQ70 676 aa22.77■■□□□ 1.24
PDLIM2-203ENST00000339162 MAGEB16A2A368 324 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 MUSKO15146 869 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 PRAMEF11O60813 436 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 MMP2P08253 660 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 GJA1P17302 382 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 HDCP19113 662 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 SERPINB9P50453 376 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 CDH4P55283 916 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 KDELC1Q6UW63 502 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 MICALCLQ6ZW33 695 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms