RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 NGLY1Q96IV0 654 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF341Q9BYN7 854 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 FRMD8P1Q9BZ68 369 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MROH8Q9H579 483 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 HPS4Q9NQG7 708 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NECTIN3Q9NQS3 549 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 EIF3KQ9UBQ5 218 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CD300AQ9UGN4 299 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DIMT1Q9UNQ2 313 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PMF1-BGLAPU3KQ54 211 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CLUHO75153 1309 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CDC42BPAQ5VT25 1732 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 K7ENM7 598 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RGS20O76081 388 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 JUNP05412 331 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SMIM6P0DI80 62 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MYF6P23409 242 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MLLT3P42568 568 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NDST2P52849 883 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TRADDQ15628 312 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RTN1Q16799 776 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SETMARQ53H47 684 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TOR2AQ5JU69 321 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RBM48Q5RL73 367 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KSR2Q6VAB6 950 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LDHAL6AQ6ZMR3 332 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 UTS2BQ765I0 119 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ERO1BQ86YB8 467 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TAGAPQ8N103 731 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 OR13F1Q8NGS4 319 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ZFAND1Q8TCF1 268 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 BAP1Q92560 729 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PTP4A1Q93096 173 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TOE1Q96GM8 510 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ASB2Q96Q27 587 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KCTD14Q9BQ13 255 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CCDC106Q9BWC9 280 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RNF26Q9BY78 433 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LRRC2Q9BYS8 371 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 BRINP2Q9C0B6 783 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NGRNQ9NPE2 291 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KCNH7Q9NS40 1196 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM39AQ9NV64 488 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 COL4A3BPQ9Y5P4 624 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 AURKAO14965 403 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LPXNO60711 386 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 UPK1BO75841 260 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CHRNA1P02708 482 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 COX4I1P13073 169 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 GJA1P17302 382 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CD79BP40259 229 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 GSTM5P46439 218 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 GBX2P52951 348 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 YWHAEP62258 255 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MTMR2Q13614 643 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 FASTKD3Q14CZ7 662 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PLCL1Q15111 1095 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 EPHA10Q5JZY3 1008 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 FAM109BQ6ICB4 259 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 FBXL19Q6PCT2 694 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DPY19L3Q6ZPD9 716 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SLC13A5Q86YT5 568 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 OR6S1Q8NH40 331 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ACDQ96AP0 544 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 OTULINQ96BN8 352 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DPYSL5Q9BPU6 564 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MUC13Q9H3R2 512 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PRDM5Q9NQX1 630 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SACM1LQ9NTJ5 587 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NXF1Q9UBU9 619 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 DNMT3LQ9UJW3 386 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 VWA7Q9Y334 891 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 LOC100653049A0A140TA62 436 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 I3L521 148 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NOP56O00567 594 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RGS5O15539 181 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ABCB7O75027 752 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 H2AFYO75367 372 aaKnown RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KRT34O76011 436 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 IL18RAPO95256 599 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SERPINB2P05120 415 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CDK1P06493 297 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ANXA6P08133 673 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 HOXB3P14651 431 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TGM2P21980 687 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 NR4A1P22736 598 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 HNF4AP41235 474 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 MEOX2P50222 304 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 RBP5P82980 135 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ATP2C1P98194 919 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-201ENST00000338963 SEMA3BQ13214 749 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CCNIQ14094 377 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 KCNAB1Q14722 419 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ACOX1Q15067 660 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 PGS1Q32NB8 556 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 ZBTB37Q5TC79 503 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 TTC23Q5W5X9 447 aa4.21□□□□□ -1.74
NEDD4-201ENST00000338963 CIAPIN1Q6FI81 312 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms