RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NAA15Q9BXJ9 866 aaKnown RBP10.9□□□□□ -0.66
CAPN3-202ENST00000337571 VPS16Q9H269 839 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 TNKS2Q9H2K2 1166 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ATP13A1Q9HD20 1204 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ANLNQ9NQW6 1124 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 DKK4Q9UBT3 224 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 HPCAL4Q9UM19 191 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 COL5A1P20908 1838 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-202ENST00000337571 IGF2RP11717 2491 aa10.9□□□□□ -0.67
CAPN3-202ENST00000337571 IGLV3-10A0A075B6K4 115 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 F8VZ95 297 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 SMAD6O43541 496 aaKnown RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 GFPT2O94808 682 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 ENDOD1O94919 500 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 THEGLP0DJG4 465 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 SDC4P31431 198 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 FLT3P36888 993 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 ETFBP38117 255 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 DNAJC3Q13217 504 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 SYCP1Q15431 976 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 C2CD6Q53TS8 623 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 OTUD1Q5VV17 481 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 NAA35Q5VZE5 725 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 RWDD4Q6NW29 188 aaKnown RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 FBXL19Q6PCT2 694 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 ERN2Q76MJ5 926 aaKnown RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 FAM131BQ86XD5 332 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 SPATS2Q86XZ4 545 aaKnown RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 MARCH9Q86YJ5 346 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 DRC7Q8IY82 874 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF683Q8IZ20 524 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 RYBPQ8N488 228 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 FAM174AQ8TBP5 190 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 KLK6Q92876 244 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 FEM1CQ96JP0 617 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 PSMB7Q99436 277 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 CEP44Q9C0F1 390 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 TMPRSS4Q9NRS4 437 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 TAB2Q9NYJ8 693 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 PPARGC1AQ9UBK2 798 aaKnown RBP10.89□□□□□ -0.67
CAPN3-202ENST00000337571 OR12D3Q9UGF7 316 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 TMEM59LQ9UK28 342 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 RAXQ9Y2V3 346 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 GPSM3Q9Y4H4 160 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 ADAMTS20P59510 1910 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 CABIN1Q9Y6J0 2220 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 KNL1Q8NG31 2342 aa10.89□□□□□ -0.67
CAPN3-202ENST00000337571 LAMA5O15230 3695 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 LEFTY1O75610 366 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CTSLP07711 333 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 PRLRP16471 622 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CKMT2P17540 419 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 HNRNPA2B1P22626 353 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 TAS2R38P59533 333 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 POLR2FP61218 127 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 RPS21P63220 83 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 NOMO3P69849 1222 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CDR2Q01850 454 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 GNA12Q03113 381 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 SGCGQ13326 291 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 ITPR1Q14643 2758 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CDO1Q16878 200 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CARD16Q5EG05 197 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 PIP5KL1Q5T9C9 394 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 DPY19L2P1Q6NXN4 242 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 C22orf39Q6P5X5 142 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 DPY19L3Q6ZPD9 716 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 HORMAD1Q86X24 394 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 DCP2Q8IU60 420 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 PCDH20Q8N6Y1 951 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 OR7D4Q8NG98 312 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 ENOX1Q8TC92 643 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 EPS8L1Q8TE68 723 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 MYOCQ99972 504 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 HEPHQ9BQS7 1158 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 CALN1Q9BXU9 219 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 RETREG1Q9H6L5 497 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 METTL5Q9NRN9 209 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 FAM207AQ9NSI2 230 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 KLHL11Q9NVR0 708 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 IPO11Q9UI26 975 aaKnown RBP10.88□□□□□ -0.67
CAPN3-202ENST00000337571 DAAM1Q9Y4D1 1078 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 AK5Q9Y6K8 562 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 DOCK9Q9BZ29 2069 aa10.88□□□□□ -0.67
CAPN3-202ENST00000337571 DOCK4Q8N1I0 1966 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ANKRD62A6NC57 917 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 NEMP2A6NFY4 417 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 I6L893 689 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-202ENST00000337571 NEMP1O14524 444 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 SDC3O75056 442 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ALPPL2P10696 532 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 KRT3P12035 628 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms