RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 STXBP2Q15833 593 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SHROOM1Q2M3G4 852 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 CEP78Q5JTW2 689 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SCIMPQ6UWF3 145 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PROX1Q92786 737 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 FAR2Q96K12 515 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 LGMNQ99538 433 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 HERC2P3Q9BVR0 1158 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 GATA5Q9BWX5 397 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PLEKHA5Q9HAU0 1116 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TRMT13Q9NUP7 481 aaKnown RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TBKBP1A7MCY6 615 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PSMD10O75832 226 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 MPOP05164 745 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 GK3PQ14409 553 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 CCDC142Q17RM4 750 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ARHGAP36Q6ZRI8 547 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PHF13Q86YI8 300 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ITFG1Q8TB96 612 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF384Q8TF68 577 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SLC39A3Q9BRY0 314 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 MID1IP1Q9NPA3 183 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 FAIMQ9NVQ4 179 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PCDHA11Q9Y5I1 949 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 E5RI56 91 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 MTA2O94776 668 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ENO2P09104 434 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ALOX5P09917 674 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 CDH13P55290 713 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 RHBDL3P58872 404 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 KRR1Q13601 381 aaKnown RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PWP1Q13610 501 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 NAPEPLDQ6IQ20 393 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PABPC5Q96DU9 382 aaKnown RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 RNF157Q96PX1 679 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 HEPHQ9BQS7 1158 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 WDR12Q9GZL7 423 aaKnown RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 EHD1Q9H4M9 534 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 POLE4Q9NR33 117 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 M0QYT0 321 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TK2O00142 265 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 LRCH4O75427 683 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TADA2AO75478 443 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 MMP8P22894 467 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PHKA2P46019 1235 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SLC18A1P54219 525 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TGFBIQ15582 683 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ZBED5Q49AG3 693 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 MON1BQ7L1V2 547 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF276Q8N554 614 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PLEKHO2Q8TD55 490 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 GAB3Q8WWW8 586 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 IMPAD1Q9NX62 359 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CYP4B1P13584 511 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 HK2P52789 917 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 IGDCC3Q8IVU1 814 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 FAR1Q8WVX9 515 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 ISOC1Q96CN7 298 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 KLHL32Q96NJ5 620 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 NUAK2Q9H093 628 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CASS4Q9NQ75 786 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 SACM1LQ9NTJ5 587 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 TBCCD1Q9NVR7 557 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 MYH2Q9UKX2 1941 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 FAM208AQ9UK61 1670 aaKnown RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 IVDP26440 423 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 STAT5BP51692 787 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 IST1P53990 364 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF470Q6ECI4 717 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CANT1Q8WVQ1 401 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 IFT43Q96FT9 208 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 TSPAN17Q96FV3 270 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CELF6Q96J87 481 aaKnown RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 PCDHGC3Q9UN70 934 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CYP1A1P04798 512 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 TSHRP16473 764 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 AOC1P19801 751 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 SOX6P35712 828 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CYP2A13Q16696 494 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 ZFP69Q49AA0 526 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 CENPLQ8N0S6 344 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 TAGAPQ8N103 731 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
COL2A1-201ENST00000337299 RSPH1Q8WYR4 309 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 EPS8L2Q9H6S3 715 aa13.41□□□□□ -0.26
COL2A1-201ENST00000337299 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms