RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 H3BM21 787 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 SKAP2O75563 359 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 FGF1P05230 155 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 SLC9A5Q14940 896 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 KRT74Q7RTS7 529 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 RBFAQ8N0V3 343 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 NDOR1Q9UHB4 597 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 TEAD4Q15561 434 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PCID2Q5JVF3 399 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ZCCHC9Q8N567 271 aaKnown RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 SLC25A23Q9BV35 468 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 MED26O95402 600 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 HDCP19113 662 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ATP6V1B2P21281 511 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 TBC1D25Q3MII6 688 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 AGKQ53H12 422 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 LPCAT1Q8NF37 534 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 MRPL57Q9BQC6 102 aaKnown RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 SAR1AQ9NR31 198 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 KIAA1522Q9P206 1035 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 COPG2Q9UBF2 871 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 LAG3P18627 525 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CDH8P55286 799 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 VAC14Q08AM6 782 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
FN1-202ENST00000336916 CRY1Q16526 586 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 TRIM40Q6P9F5 258 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 PHYKPLQ8IUZ5 450 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 CYLDQ9NQC7 956 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 ABI3Q9P2A4 366 aa12.42□□□□□ -0.42
FN1-202ENST00000336916 TMEM88BA6NKF7 163 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 BIRC5O15392 142 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 PEX1O43933 1283 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ABCB1P08183 1280 aaPredicted RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 BDNFP23560 247 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 S100A3P33764 101 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 COX10Q12887 443 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 PACS1Q6VY07 963 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 TFAP2DQ7Z6R9 452 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 CENPTQ96BT3 561 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 PPP3R2Q96LZ3 170 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 RCVRNP35243 200 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ZNF143P52747 638 aaPredicted RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 ACTR3P61158 418 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 CSHL1Q14406 222 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ZNF470Q6ECI4 717 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 EPHX4Q8IUS5 362 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 HASPINQ8TF76 798 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 SPRTNQ9H040 489 aaPredicted RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 CDC42EP4Q9H3Q1 356 aaKnown RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 REEP1Q9H902 201 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 C3orf14Q9HBI5 128 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 OR12D3Q9UGF7 316 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 SEC22BO75396 215 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 CCDC81Q6ZN84 652 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ANKRD52Q8NB46 1076 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 DDHD1Q8NEL9 900 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ZSCAN18Q8TBC5 510 aaPredicted RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 GPR1P46091 355 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ACSM2AQ08AH3 577 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ELP6Q0PNE2 266 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ACSM2BQ68CK6 577 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 C2orf15Q8WU43 125 aaKnown RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 HNRNPH1P31943 449 aaKnown RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 RAP1GAPP47736 663 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 MARSP56192 900 aaKnown RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 FUT11Q495W5 492 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 SPANXN2Q5MJ10 180 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 SCUBE3Q8IX30 993 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 TOP6BLQ8N6T0 577 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 TRIM16LQ309B1 348 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 RFX8Q6ZV50 586 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ZNF786Q8N393 782 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 AP3S1Q92572 193 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ANGPT4Q9Y264 503 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 SLC9A8Q9Y2E8 581 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
FN1-202ENST00000336916 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 CPSF4O95639 269 aaKnown RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 TOP3AQ13472 1001 aaPredicted RBP12.41□□□□□ -0.42
FN1-202ENST00000336916 PARP15Q460N3 678 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 TMPRSS6Q8IU80 811 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 KCNN2Q9H2S1 579 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 KCNE2Q9Y6J6 123 aa12.41□□□□□ -0.42
FN1-202ENST00000336916 ATG2BQ96BY7 2078 aa12.4□□□□□ -0.42
FN1-202ENST00000336916 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
FN1-202ENST00000336916 SERPINB7O75635 380 aa12.4□□□□□ -0.42
FN1-202ENST00000336916 KRT33AO76009 404 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms