RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 DGKDQ16760 1214 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 SV2CQ496J9 727 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
CDCA4-201ENST00000336219 LCA5Q86VQ0 697 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 TICAM1Q8IUC6 712 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 SPNS2Q8IVW8 549 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 RNF169Q8NCN4 708 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 ZSCAN18Q8TBC5 510 aaPredicted RBP20.24■□□□□ 0.83
CDCA4-201ENST00000336219 SLC2A13Q96QE2 648 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 UNKQ9C0B0 810 aaKnown RBP20.24■□□□□ 0.83
CDCA4-201ENST00000336219 NMRAL1Q9HBL8 299 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 RAB26Q9ULW5 256 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 RRN3P2A6NIE6 340 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 FAM72CH0Y354 149 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 CAPN15O75808 1086 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 DUSP28Q4G0W2 176 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 FAM72AQ5TYM5 149 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 FAM72DQ6L9T8 149 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 C16orf89Q6UX73 402 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 FAM72BQ86X60 149 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 OR6J1Q8NGC5 347 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 URGCPQ8TCY9 931 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 TMA16Q96EY4 203 aaKnown RBP20.24■□□□□ 0.83
CDCA4-201ENST00000336219 NPAS2Q99743 824 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 Q9H521 79 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 LRRC4Q9HBW1 653 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 BFARQ9NZS9 450 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 ZDHHC2Q9UIJ5 367 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 ZNF236Q9UL36 1845 aa20.24■□□□□ 0.83
CDCA4-201ENST00000336219 H3BSA7 217 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 MATN2O00339 956 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PIGNO95427 931 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 ARSAP15289 507 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 ERCC2P18074 760 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 GJA5P36382 358 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 CCNA1P78396 465 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 CDC42EP1Q00587 391 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PPP2R5DQ14738 602 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 MYBPC3Q14896 1274 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PCBP1Q15365 356 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 HFE2Q6ZVN8 426 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PAQR9Q6ZVX9 377 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PPP1R13LQ8WUF5 828 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 KCTD13Q8WZ19 329 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 SERPINI1Q99574 410 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 MRPL1Q9BYD6 325 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 MRPS26Q9BYN8 205 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 ILKAPQ9H0C8 392 aaPredicted RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 RNF39Q9H2S5 420 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 CASS4Q9NQ75 786 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PRPF19Q9UMS4 504 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 GRID2O43424 1007 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 XPOTO43592 962 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 KCNE1P15382 129 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PTPN1P18031 435 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 WARSP23381 471 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 AVPR1AP37288 418 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 SCNN1BP51168 640 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 FRG1Q14331 258 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 NRF1Q16656 503 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 XKR4Q5GH76 650 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 ARL13AQ5H913 290 aaPredicted RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 CERCAMQ5T4B2 595 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 ZNF467Q7Z7K2 595 aaPredicted RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 CLEC14AQ86T13 490 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 SEMA6AQ9H2E6 1030 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 RHBDL2Q9NX52 303 aa20.23■□□□□ 0.83
CDCA4-201ENST00000336219 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 HEMK1Q9Y5R4 338 aaPredicted RBP20.23■□□□□ 0.83
CDCA4-201ENST00000336219 SHROOM3Q8TF72 1996 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 RNASEH2AO75792 299 aaKnown RBP20.22■□□□□ 0.83
CDCA4-201ENST00000336219 TMCC1O94876 653 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 TNFAIP8O95379 198 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 FAM200BP0CF97 657 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 ADRA1BP35368 520 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 GRIA4P48058 902 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 METTL21CQ5VZV1 264 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 SEL1L3Q68CR1 1132 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 KCTD11Q693B1 232 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 SIX6OS1Q8N1H7 587 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDCA4-201ENST00000336219 DNAAF3Q8N9W5 541 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 WDR41Q9HAD4 459 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 NRCAMQ92823 1304 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 TMEM114B3SHH9 223 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 TMEM233B4DJY2 109 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 MPOP05164 745 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 TPH1P17752 444 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 LILRA4P59901 499 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 HPCAP84074 193 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 CYTH1Q15438 398 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 CLEC20AQ6ZU45 233 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 PDZD4Q76G19 769 aaPredicted RBP20.22■□□□□ 0.83
CDCA4-201ENST00000336219 AHI1Q8N157 1196 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 SLC9A7Q96T83 725 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 TASP1Q9H6P5 420 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 ANLNQ9NQW6 1124 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 OXSMQ9NWU1 459 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 SLC39A10Q9ULF5 831 aa20.22■□□□□ 0.83
CDCA4-201ENST00000336219 I6L893 689 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms