RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 F5H5T6 163 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 DPYSL4O14531 572 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TPP1O14773 563 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TYROBPO43914 113 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ANXA9O76027 345 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 GUCA1CO95843 209 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CYP1A1P04798 512 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 RPL17P18621 184 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ICAM3P32942 547 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 GRM5P41594 1212 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 GPD2P43304 727 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ASPAP45381 313 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 HDAC4P56524 1084 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 DUSP4Q13115 394 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 UGP2Q16851 508 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SPRYD7Q5W111 196 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 GRAMD4Q6IC98 578 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 LRRC8BQ6P9F7 803 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 IGDCC3Q8IVU1 814 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 FAM156AQ8NDB6 213 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TUBGCP3Q96CW5 907 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MFSD3Q96ES6 412 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CSPG4P5Q96PW8 444 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 S100A14Q9HCY8 104 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 COMMD3-BMI1R4GMX3 469 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MOXD2PA6NHM9 499 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MEIS3P2A8K0S8 358 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 RAMP2O60895 175 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TBX18O95935 607 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MT-CYBP00156 380 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 UQCRBP14927 111 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 KLRC2P26717 231 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MATKP42679 507 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 NOVP48745 357 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MRPS5P82675 430 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 MRPS6P82932 125 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 KCNA10Q16322 511 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 GSTA3Q16772 222 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 FAM110CQ1W6H9 321 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SOWAHAQ2M3V2 549 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 C6orf52Q5T4I8 152 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ADGRD1Q6QNK2 874 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 LCLAT1Q6UWP7 414 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 UTS2BQ765I0 119 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 AMIGO2Q86SJ2 522 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SNX32Q86XE0 403 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 LGI2Q8N0V4 545 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PIWIL2Q8TC59 973 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 ZNF398Q8TD17 642 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 FCRL2Q96LA5 508 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CATSPER2Q96P56 530 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 YME1L1Q96TA2 773 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CINPQ9BW66 212 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SDCBP2Q9H190 292 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 UPF3AQ9H1J1 476 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PPCSQ9HAB8 311 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 BPIFA1Q9NP55 256 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 CHRAC1Q9NRG0 131 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PAIP2BQ9ULR5 123 aaKnown RBP6.58□□□□□ -1.36
HMG20A-201ENST00000336216 SH3BP1Q9Y3L3 701 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PKP3Q9Y446 797 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
HMG20A-201ENST00000336216 TTC24A2A3L6 582 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SLC15A5A6NIM6 579 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CXorf49A8MYA2 514 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 E2F6O75461 281 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 TCEA3O75764 348 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 TMCC1O94876 653 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ITGAVP06756 1048 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 YWHAQP27348 245 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 NNMTP40261 264 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ATP1A4Q13733 1029 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PSMD5Q16401 504 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 NFE2Q16621 373 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 C11orf91Q3C1V1 193 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SCIMPQ6UWF3 145 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 B3GNT6Q6ZMB0 384 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 FAM35AQ86V20 835 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ZNF786Q8N393 782 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 DRAXINQ8NBI3 349 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 LPCAT1Q8NF37 534 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 ZC3H15Q8WU90 426 aaKnown RBP6.57□□□□□ -1.36
HMG20A-201ENST00000336216 PCED1BQ96HM7 432 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 C12orf42Q96LP6 360 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CYP2S1Q96SQ9 504 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SYT11Q9BT88 431 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 COLEC11Q9BWP8 271 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 CIPCQ9C0C6 399 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 HPS4Q9NQG7 708 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 SIX4Q9UIU6 781 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 NENFQ9UMX5 172 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 QSER1Q2KHR3 1735 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 A0A0A0MRY4 1105 aa6.57□□□□□ -1.36
HMG20A-201ENST00000336216 AKAP10O43572 662 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms