RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SF3B1O75533 1304 aaKnown RBP eCLIP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 OR1E1P30953 314 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 DEFB103AP81534 67 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 BFSP2Q13515 415 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 GRM3Q14832 879 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 FYB2Q5VWT5 728 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 KCTD11Q693B1 232 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 CYB5D1Q6P9G0 228 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 RPS27LQ71UM5 84 aaKnown RBP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SERPINB11Q96P15 392 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 OMDQ99983 421 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 TBL1YQ9BQ87 522 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 TTPALQ9BTX7 342 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 TRPC7Q9HCX4 862 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SLC12A4Q9UP95 1085 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 SCML2Q9UQR0 700 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 TM9SF1O15321 606 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 PRSS56P0CW18 603 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 CCL5P13501 91 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 GJA1P17302 382 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 ITGA9Q13797 1035 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 GALNT3Q14435 633 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 NADSYN1Q6IA69 706 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 ST13P5Q8NFI4 369 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 MIEF2Q96C03 454 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 LRRC39Q96DD0 335 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 OSBPL2Q9H1P3 480 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 CATSPERBQ9H7T0 1116 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 CASS4Q9NQ75 786 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
LIMK1-201ENST00000336180 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
LIMK1-201ENST00000336180 C2orf78A6NCI8 922 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 MUSKO15146 869 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ITGB8P26012 769 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ARRB2P32121 409 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 CDK7P50613 346 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ARFIP2P53365 341 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
LIMK1-201ENST00000336180 PRPSAP1Q14558 356 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ITPRIPL1Q6GPH6 555 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 LINGO4Q6UY18 593 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 NPAS4Q8IUM7 802 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ARL10Q8N8L6 244 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 RTL3Q8N8U3 475 aaKnown RBP12.78□□□□□ -0.36
LIMK1-201ENST00000336180 SLC43A3Q8NBI5 491 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 RXFP1Q9HBX9 757 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 KLC4Q9NSK0 619 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ZFP69BQ9UJL9 534 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 PHF24Q9UPV7 400 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 TROVE2P10155 538 aaKnown RBP eCLIP12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ALDH3A1P30838 453 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 SLC6A4P31645 630 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 WNT3AP56704 352 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 SETDB1Q15047 1291 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 TEDDM1Q5T9Z0 273 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 PTAR1Q7Z6K3 402 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-201ENST00000336180 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 RILPQ96NA2 401 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 ARL8BQ9NVJ2 186 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 RRN3Q9NYV6 651 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
LIMK1-201ENST00000336180 FIS1Q9Y3D6 152 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 USH1CQ9Y6N9 552 aa12.78□□□□□ -0.36
LIMK1-201ENST00000336180 CASP8AP2Q9UKL3 1982 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 TK2O00142 265 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 GABRB3P28472 473 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 AQP5P55064 265 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 MPP3Q13368 585 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 EIF4EBP2Q13542 120 aaPredicted RBP12.77□□□□□ -0.36
LIMK1-201ENST00000336180 ZRSR2Q15696 482 aaKnown RBP12.77□□□□□ -0.36
LIMK1-201ENST00000336180 TAF12Q16514 161 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 HAPLN3Q96S86 360 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 FRMD8Q9BZ67 464 aaPredicted RBP12.77□□□□□ -0.36
LIMK1-201ENST00000336180 PHACTR1Q9C0D0 580 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 KCNK13Q9HB14 408 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 MAN1C1Q9NR34 630 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 PLK2Q9NYY3 685 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 MYO16Q9Y6X6 1858 aa12.77□□□□□ -0.36
LIMK1-201ENST00000336180 A0A096LPK6 155 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 SLC38A8A6NNN8 435 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 DHRS4L1P0CG22 281 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 ALADP13716 330 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 HCAR3P49019 387 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 ELF3P78545 371 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 BNIP1Q12981 228 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 USP4Q13107 963 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 PEX6Q13608 980 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 LACTB2Q53H82 288 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 MANEALQ5VSG8 457 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 STEAP4Q687X5 459 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 OTOP2Q7RTS6 562 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 NLRC5Q86WI3 1866 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 PGBD5Q8N414 524 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 ALKBH8Q96BT7 664 aaKnown RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 SCYL1Q96KG9 808 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 MRGPRX2Q96LB1 330 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms