RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 BEND6Q5SZJ8 279 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 ERMARDQ5T6L9 678 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 KAZNQ674X7 775 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 NADSYN1Q6IA69 706 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 RFWD3Q6PCD5 774 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 SYDE1Q6ZW31 735 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 BBS12Q6ZW61 710 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 CYP4V2Q6ZWL3 525 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 JAMLQ86YT9 394 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 PSTKQ8IV42 348 aaKnown RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 KDM1BQ8NB78 822 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 ATL2Q8NHH9 583 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 C1orf54Q8WWF1 131 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 SLCO2A1Q92959 643 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 NT5C3BQ969T7 300 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 PRICKLE1Q96MT3 831 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 PEBP4Q96S96 227 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 NPY6RQ99463 290 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 ERP44Q9BS26 406 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 HERPUD2Q9BSE4 406 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 MAK16Q9BXY0 300 aaKnown RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 TPSD1Q9BZJ3 242 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 ABCB8Q9NUT2 735 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 POLR3BQ9NW08 1133 aaPredicted RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
SYN3-201ENST00000332840 MYO16Q9Y6X6 1858 aa9.98□□□□□ -0.81
SYN3-201ENST00000332840 ZFYVE26Q68DK2 2539 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 A0A1B0GVM2 712 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 TCAF2A6NFQ2 919 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 ZNF487B1APH4 448 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 H0Y626 953 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 SEC31AO94979 1220 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 LUC7L3O95232 432 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 ECEL1O95672 775 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 DLDP09622 509 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 KRT10P13645 584 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 GABRG2P18507 467 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 TACR2P21452 398 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 SLC6A4P31645 630 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 RDXP35241 583 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 HOXD12P35452 270 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 ARSEP51690 589 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 DRG2P55039 364 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 ST8SIA6P61647 398 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 DEUP1Q05D60 604 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 NME3Q13232 169 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 TFDP2Q14188 446 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 ZNF234Q14588 700 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 FNDC3BQ53EP0 1204 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 RAB6CQ53S08 254 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 RAP1GAP2Q684P5 730 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 PMS2CLQ68D20 193 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 DUPD1Q68J44 220 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 TTC27Q6P3X3 843 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 EMBQ6PCB8 327 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 DRICH1Q6PGQ1 229 aaPredicted RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 CHST9Q7L1S5 443 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 LPCAT2Q7L5N7 544 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 HDXQ7Z353 690 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 BNIPLQ7Z465 357 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 RABEPKQ7Z6M1 372 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 KIAA0907Q7Z7F0 614 aaPredicted RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 KBTBD6Q86V97 674 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 RFX6Q8HWS3 928 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 LGI2Q8N0V4 545 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 CASKIN2Q8WXE0 1202 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 IFT81Q8WYA0 676 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 SEC14L1Q92503 715 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 SNRNP25Q9BV90 132 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 RAB6CQ9H0N0 254 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 WDCPQ9H6R7 721 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 PRDM16Q9HAZ2 1276 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 SEMA4GQ9NTN9 838 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.97□□□□□ -0.81
SYN3-201ENST00000332840 CALCOCO1Q9P1Z2 691 aa9.97□□□□□ -0.81
SYN3-201ENST00000332840 KIAA1522Q9P206 1035 aaPredicted RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 DRG1Q9Y295 367 aaKnown RBP9.97□□□□□ -0.81
SYN3-201ENST00000332840 ZZEF1O43149 2961 aa9.96□□□□□ -0.81
SYN3-201ENST00000332840 THADAQ6YHU6 1953 aa9.96□□□□□ -0.81
SYN3-201ENST00000332840 SYNJ2BP-COX16A0A087WUM0 186 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 GOLGA6L7A0A1B0GV03 622 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 CST8O60676 142 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 CLDN11O75508 207 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 GAS8O95995 478 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 EPHX1P07099 455 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 NDUFV2P19404 249 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 TFE3P19532 575 aaPredicted RBP9.96□□□□□ -0.82
SYN3-201ENST00000332840 MPLP40238 635 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 IL12RB1P42701 662 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 WASP42768 502 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 KCNJ1P48048 391 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 CARSP49589 748 aaKnown RBP9.96□□□□□ -0.82
SYN3-201ENST00000332840 CXCR3P49682 368 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 AIF1P55008 147 aa9.96□□□□□ -0.82
SYN3-201ENST00000332840 RPS24P62847 133 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms