RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SIKE1Q9BRV8 207 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 NOL6Q9H6R4 1146 aaKnown RBP17.67■□□□□ 0.42
DDX28-201ENST00000332395 NSMCE4AQ9NXX6 385 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 IPO11Q9UI26 975 aaKnown RBP17.67■□□□□ 0.42
DDX28-201ENST00000332395 FNDC1Q4ZHG4 1894 aaPredicted RBP17.67■□□□□ 0.42
DDX28-201ENST00000332395 C2P06681 752 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 RALBP11234 206 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 ESRRAP11474 423 aaPredicted RBP17.67■□□□□ 0.42
DDX28-201ENST00000332395 CPA3P15088 417 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 ADRA1AP35348 466 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 CDK7P50613 346 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 IRF9Q00978 393 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 EFEMP1Q12805 493 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 LHX8Q68G74 356 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 ABI1Q8IZP0 508 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 TNS4Q8IZW8 715 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 ACVR1CQ8NER5 493 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 B3GALT6Q96L58 329 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 ZNF570Q96NI8 536 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 EBF4Q9BQW3 602 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 FSD1LQ9BXM9 530 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 CADM1Q9BY67 442 aaKnown RBP17.67■□□□□ 0.42
DDX28-201ENST00000332395 ENTPD7Q9NQZ7 604 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 FNIP2Q9P278 1114 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 CAPN14A8MX76 684 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 PMPCBO75439 489 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 ATP5BP06576 529 aaKnown RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 IRX1P78414 480 aaPredicted RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 ANO4Q32M45 955 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 ZNF280DQ6N043 979 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 ZNF683Q8IZ20 524 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 PPHLN1Q8NEY8 458 aaKnown RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 RILPQ96NA2 401 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 GPR22Q99680 433 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 SLC24A3Q9HC58 644 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 IL37Q9NZH6 218 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 GYG2O15488 501 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 COL6A1P12109 1028 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 HADHAP40939 763 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 MRPL58Q14197 206 aaKnown RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 GRM3Q14832 879 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 MS4A13Q5J8X5 152 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 POTEHQ6S545 545 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 ATG14Q6ZNE5 492 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 TFAP2DQ7Z6R9 452 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 ZC3HC1Q86WB0 502 aaKnown RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 TREML1Q86YW5 311 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 CCDC117Q8IWD4 279 aaPredicted RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 UMODL1-AS1Q8N2C9 162 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 PPP4R1Q8TF05 950 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 MRGPRX2Q96LB1 330 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 SORT1Q99523 831 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 GPR62Q9BZJ7 368 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX28-201ENST00000332395 RHOJQ9H4E5 214 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
DDX28-201ENST00000332395 SLC39A10Q9ULF5 831 aa17.66■□□□□ 0.42
DDX28-201ENST00000332395 FAM92AA1XBS5 289 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 OR6C75A6NL08 312 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 DIAPH2O60879 1101 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 SOAT2O75908 522 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 SELPP16109 830 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 YWHAQP27348 245 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 ARRB2P32121 409 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 ARPP19P56211 112 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 PSMD5Q16401 504 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 RINLQ6ZS11 566 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 PXYLP1Q8TE99 480 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 PTCD2Q8WV60 388 aaKnown RBP17.65■□□□□ 0.42
DDX28-201ENST00000332395 FBXO32Q969P5 355 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 ZYG11BQ9C0D3 744 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 TCAF1Q9Y4C2 921 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 MYLKQ15746 1914 aa17.65■□□□□ 0.42
DDX28-201ENST00000332395 ARVCFO00192 962 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 KIF3CO14782 793 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 GSC2O15499 205 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 VAPBO95292 243 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 TBX18O95935 607 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 PEX11BO96011 259 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 INHAP05111 366 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 SERPINA6P08185 405 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 RHOQP17081 205 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 CSRP3P50461 194 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 NDST2P52849 883 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 ALDH18A1P54886 795 aaKnown RBP17.64■□□□□ 0.42
DDX28-201ENST00000332395 ABCE1P61221 599 aaKnown RBP17.64■□□□□ 0.42
DDX28-201ENST00000332395 ESRP1Q6NXG1 681 aaKnown RBP17.64■□□□□ 0.42
DDX28-201ENST00000332395 RANBP10Q6VN20 620 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 CNTN4Q8IWV2 1026 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 OR6Y1Q8NGX8 325 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 ATXN3LQ9H3M9 355 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 STN1Q9H668 368 aaKnown RBP17.64■□□□□ 0.42
DDX28-201ENST00000332395 ELAC1Q9H777 363 aaKnown RBP17.64■□□□□ 0.42
DDX28-201ENST00000332395 TAS2R1Q9NYW7 299 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 CLIC5Q9NZA1 410 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 RPL26L1Q9UNX3 145 aaKnown RBP17.64■□□□□ 0.42
DDX28-201ENST00000332395 PCDHB7Q9Y5E2 793 aa17.64■□□□□ 0.42
DDX28-201ENST00000332395 G3V2L1 256 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms