RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 NAT10Q9H0A0 1025 aaKnown RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 ABCB8Q9NUT2 735 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 POLR3BQ9NW08 1133 aaPredicted RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 ARHGEF38Q9NXL2 777 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 CACNA2D2Q9NY47 1150 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 WSB2Q9NYS7 404 aaPredicted RBP6.53□□□□□ -1.36
SMG1-201ENST00000330588 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 NAALADL1Q9UQQ1 740 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 SIK3Q9Y2K2 1263 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 HIF3AQ9Y2N7 669 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 THADAQ6YHU6 1953 aa6.53□□□□□ -1.36
SMG1-201ENST00000330588 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 LNP1A1A4G5 178 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 MEGF11A6BM72 1044 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ANTXRLA6NF34 631 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 C10orf142B7Z368 130 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 DCLK1O15075 740 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CLDN11O75508 207 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ENDOD1O94919 500 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CALCAP01258 141 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ERBB2P04626 1255 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CYP1A1P04798 512 aaPredicted RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 CCDC172P0C7W6 258 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 POLR2EP19388 210 aaKnown RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 SOX5P35711 763 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 PREPP48147 710 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 DHPSP49366 369 aaPredicted RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 CXCR3P49682 368 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 SGSHP51688 502 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 NOMO3P69849 1222 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CDR2Q01850 454 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CREB5Q02930 508 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ZNF33AQ06730 810 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CDH18Q13634 790 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 RAPGEF1Q13905 1077 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 HNRNPDQ14103 355 aaKnown RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 HNRNPA1L2Q32P51 320 aaKnown RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 SLC25A52Q3SY17 297 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 WDR45BQ5MNZ6 344 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 STPG1Q5TH74 334 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 OR6B2Q6IFH4 312 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ZNF783Q6ZMS7 281 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 FAM183BPQ6ZVS7 135 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CHSY1Q86X52 802 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ERICH1Q86X53 443 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 TMPRSS6Q8IU80 811 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CREBRFQ8IUR6 639 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 DEFB106AQ8N104 65 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 C18orf8Q96DM3 657 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 SIPA1Q96FS4 1042 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 TCF12Q99081 682 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 EDEM2Q9BV94 578 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 NUP58Q9BVL2 599 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 LSM14BQ9BX40 385 aaKnown RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 CIPCQ9C0C6 399 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 CAPN10Q9HC96 672 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 ACP6Q9NPH0 428 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 DDIT4Q9NX09 232 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.52□□□□□ -1.36
SMG1-201ENST00000330588 ADAMTS1Q9UHI8 967 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 NOCTQ9UK39 431 aaKnown RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 AJAP1Q9UKB5 411 aaPredicted RBP6.52□□□□□ -1.36
SMG1-201ENST00000330588 CLEC4EQ9ULY5 219 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 SOX13Q9UN79 622 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 TBC1D30Q9Y2I9 924 aa6.52□□□□□ -1.36
SMG1-201ENST00000330588 NYNRINQ9P2P1 1898 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 PCDH15Q96QU1 1955 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ATG2BQ96BY7 2078 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 CEP192Q8TEP8 1941 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 IGLV3-10A0A075B6K4 115 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 EDDM13A0A1B0GTR0 161 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 SMTNL1A8MU46 457 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 METTL12A8MUP2 240 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ALOX15BO15296 676 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 TSPAN3O60637 253 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 NDUFS2O75306 463 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 EPHX1P07099 455 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 SYPP08247 313 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ZNF883P0CG24 379 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ACADMP11310 421 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 GNSP15586 552 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 MMP8P22894 467 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 VAMP1P23763 118 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 PRKCHP24723 683 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 STAT1P42224 750 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 PTPN9P43378 593 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 TPMTP51580 245 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 COPB1P53618 953 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 CDH4P55283 916 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 ST8SIA6P61647 398 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 RPS24P62847 133 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 APBA1Q02410 837 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 RPL6Q02878 288 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 SLC14A1Q13336 389 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 PLEKHG6Q3KR16 790 aa6.52□□□□□ -1.37
SMG1-201ENST00000330588 TTC31Q49AM3 519 aaPredicted RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 FNDC3BQ53EP0 1204 aaKnown RBP6.52□□□□□ -1.37
SMG1-201ENST00000330588 ZC3H12AQ5D1E8 599 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms