RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MORF4L2Q15014 288 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 C16orf46Q6P387 395 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 DRICH1Q6PGQ1 229 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 POLNQ7Z5Q5 900 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP37Q86T82 979 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 FAM178BQ8IXR5 827 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 C12orf56Q8IXR9 622 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 TCAIMQ8N3R3 496 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 PAF1Q8N7H5 531 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 SIMC1Q8NDZ2 872 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 FLCNQ8NFG4 579 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 BCL7CQ8WUZ0 217 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 LRTOMTQ8WZ04 291 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 EIF2AK1Q9BQI3 630 aaKnown RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 DHRS4Q9BTZ2 278 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 MRIQ9BWK5 157 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 STRA6Q9BX79 667 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 VRTNQ9H8Y1 702 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 VPS4AQ9UN37 437 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 EVPLLA8MZ36 301 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 H0YJX3 145 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ATP5BP06576 529 aaKnown RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ETS1P14921 441 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 CYP2C18P33260 490 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 QARSP47897 775 aaKnown RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 TMBIM6P55061 237 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 AOC3Q16853 763 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 MTX3Q5HYI7 312 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 NHSL2Q5HYW2 709 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ATAD3CQ5T2N8 411 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 GALNT12Q8IXK2 581 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ZCCHC7Q8N3Z6 543 aaKnown RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 PIK3R3Q92569 461 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 CHST12Q9NRB3 414 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ANAPC7Q9UJX3 599 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF221Q9UK13 617 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 SHOC2Q9UQ13 582 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 TYW5A2RUC4 315 aaKnown RBP12.02□□□□□ -0.48
SHMT2-201ENST00000328923 OR5K3A6NET4 321 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 FAM155AB1AL88 458 aaPredicted RBP12.02□□□□□ -0.48
SHMT2-201ENST00000328923 USP17L10C9JJH3 530 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 SH3BP5O60239 455 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 FAM189A1O60320 539 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 FOSP01100 380 aaPredicted RBP12.02□□□□□ -0.48
SHMT2-201ENST00000328923 COX4I1P13073 169 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 NCF2P19878 526 aaPredicted RBP12.02□□□□□ -0.48
SHMT2-201ENST00000328923 GLRA2P23416 452 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 SHMT1P34896 483 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 SREBF1P36956 1147 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 VAMP7P51809 220 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 CDC20Q12834 499 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 GATAD2AQ86YP4 633 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 NUDCD3Q8IVD9 361 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 MFSD4AQ8N468 514 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 OR13F1Q8NGS4 319 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 USP13Q92995 863 aaPredicted RBP12.02□□□□□ -0.48
SHMT2-201ENST00000328923 SH3KBP1Q96B97 665 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 ZNF778Q96MU6 729 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 CDRT15Q96T59 188 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 RMDN3Q96TC7 470 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 C17orf62Q9BQA9 187 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 IKZF4Q9H2S9 585 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 EPS8L2Q9H6S3 715 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 BCAS3Q9H6U6 928 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.48
SHMT2-201ENST00000328923 RNF103O00237 685 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 AIM2O14862 343 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 AREL1O15033 823 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 SEMA3DO95025 777 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 IL18RAPO95256 599 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 DLGAP3O95886 979 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 UGT2B4P06133 528 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 HLA-DOAP06340 250 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 BMP4P12644 408 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 CYP11B1P15538 503 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 RPL17P18621 184 aaKnown RBP12.02□□□□□ -0.49
SHMT2-201ENST00000328923 POLR2IP36954 125 aaKnown RBP12.02□□□□□ -0.49
SHMT2-201ENST00000328923 YAP1P46937 504 aaKnown RBP12.02□□□□□ -0.49
SHMT2-201ENST00000328923 LEPRP48357 1165 aaKnown RBP12.02□□□□□ -0.49
SHMT2-201ENST00000328923 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-201ENST00000328923 MFAP3P55082 362 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 GAD2Q05329 585 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 TRPC3Q13507 836 aa12.02□□□□□ -0.49
SHMT2-201ENST00000328923 PDPK2PQ6A1A2 396 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms