RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SMAPO00193 183 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 ARNTLO00327 626 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 TP73O15350 636 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 NEBLO76041 1014 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 METTL18O95568 372 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 MYBL2P10244 700 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 NFKB1P19838 968 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 PSMB4P28070 264 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 GEMIN4P57678 1058 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 BASP1P80723 227 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 ARF5P84085 180 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 SLC10A7Q0GE19 358 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 ZNF235Q14590 738 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 KCNJ11Q14654 390 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 MORF4L2Q15014 288 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 TAB3Q8N5C8 712 aaPredicted RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 WFIKKN2Q8TEU8 576 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 RPP25Q9BUL9 199 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 NEUROG2Q9H2A3 272 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 DNAJC17Q9NVM6 304 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 HAUS2Q9NVX0 235 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 SLC27A6Q9Y2P4 619 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 COL4A2P08572 1712 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 CISD3P0C7P0 127 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 DGKGP49619 791 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 NUMBP49757 651 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 PLTPP55058 493 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 LEKR1Q6ZMV7 388 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 C12orf40Q86WS4 652 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 KLHDC8BQ8IXV7 354 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 GSPT2Q8IYD1 628 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 AHI1Q8N157 1196 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 BBS5Q8N3I7 341 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 NAT16Q8N8M0 369 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 PRCCQ92733 491 aaPredicted RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 PPP1R2P1Q96PQ5 205 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 GLOD4Q9HC38 313 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 EIF2B3Q9NR50 452 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 SEPT3Q9UH03 358 aa10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 MYO18AQ92614 2054 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-201ENST00000327028 CCDC151A5D8V7 595 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 OTOL1A6NHN0 477 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 TULP3O75386 442 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 TPSB2P20231 275 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 HSPA9P38646 679 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 TPSAB1Q15661 275 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 INO80DQ53TQ3 878 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 FAXCQ5TGI0 409 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 RETSATQ6NUM9 610 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 NAT8LQ8N9F0 302 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 FBXO25Q8TCJ0 367 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 NXPE3Q969Y0 559 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 EXOC4Q96A65 974 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 GORASP1Q9BQQ3 440 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 CINPQ9BW66 212 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 BRD9Q9H8M2 597 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 NT5MQ9NPB1 228 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 TICRRQ7Z2Z1 1910 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 MIA3Q5JRA6 1907 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 DYNC1I1O14576 645 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ERLIN1O75477 346 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 TMEM63AO94886 807 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 CD160O95971 181 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 SULT2A1Q06520 285 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 SLC20A2Q08357 652 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 PRPSAP1Q14558 356 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ITPRIPL2Q3MIP1 535 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 MAP9Q49MG5 647 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ANKRD22Q5VYY1 191 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ALG1LQ6GMV1 187 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 GRAMD4Q6IC98 578 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 PTCRAQ6ISU1 281 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 LINGO4Q6UY18 593 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 METTL3Q86U44 580 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ADIPOR2Q86V24 386 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 PGBD5Q8N414 524 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 AENQ8WTP8 325 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 PSKH2Q96QS6 385 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 FCRL5Q96RD9 977 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 FMO2Q99518 471 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ARGLU1Q9NWB6 273 aaPredicted RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 MTRF1LQ9UGC7 380 aaKnown RBP10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 FAM50BQ9Y247 325 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 ACTL7AQ9Y615 435 aa10.42□□□□□ -0.74
VIPAS39-201ENST00000327028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 E7EVH7 732 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 F5H423 210 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 TMCC1O94876 653 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GJA4P35212 333 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 SERPINH1P50454 418 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 CYTH1Q15438 398 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 ZCCHC9Q8N567 271 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 TTC17Q96AE7 1141 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 MGME1Q9BQP7 344 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 FOXP3Q9BZS1 431 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 POLR1EQ9GZS1 481 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms