RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 MAGEB16A2A368 324 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 PTPN3P26045 913 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 RHDQ02161 417 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 GRM3Q14832 879 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 SLC25A52Q3SY17 297 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 UNC93AQ86WB7 457 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
SSH1-201ENST00000326470 MAELQ96JY0 434 aaKnown RBP16.99■□□□□ 0.31
SSH1-201ENST00000326470 ZNF512Q96ME7 567 aaPredicted RBP16.99■□□□□ 0.31
SSH1-201ENST00000326470 BIRC8Q96P09 236 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 SEMA6AQ9H2E6 1030 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 SMARCAD1Q9H4L7 1026 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 IARS2Q9NSE4 1012 aaKnown RBP16.99■□□□□ 0.31
SSH1-201ENST00000326470 MYRFQ9Y2G1 1151 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 PCDHGA7Q9Y5G6 932 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 C22orf31O95567 290 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 SULT1E1P49888 294 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 BCAT1P54687 386 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 TUBA4AP68366 448 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 TMED1Q13445 227 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 CERCAMQ5T4B2 595 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 KCTD11Q693B1 232 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 POTEHQ6S545 545 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 MAMDC4Q6UXC1 1216 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 LBX2Q6XYB7 198 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 LPCAT2Q7L5N7 544 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 TP53INP2Q8IXH6 220 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 KDM1BQ8NB78 822 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 TRPC4APQ8TEL6 797 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 LRTOMTQ8WZ04 291 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 SPATA33Q96N06 139 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 DNAI2Q9GZS0 605 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 DPEP3Q9H4B8 488 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 PNPLA3Q9NST1 481 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 ACADSBP45954 432 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 GLRBP48167 497 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 ACBD5Q5T8D3 534 aaPredicted RBP16.98■□□□□ 0.31
SSH1-201ENST00000326470 KLHL35Q6PF15 583 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 DHRS4L2Q6PKH6 230 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 DEFB106AQ8N104 65 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 LRRC43Q8N309 656 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 OR6B3Q8NGW1 331 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 ABTB1Q969K4 478 aaPredicted RBP16.98■□□□□ 0.31
SSH1-201ENST00000326470 SCYL1Q96KG9 808 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 TMEM79Q9BSE2 394 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 CAAP1Q9H8G2 361 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 TMPRSS4Q9NRS4 437 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 OLAHQ9NV23 265 aa16.98■□□□□ 0.31
SSH1-201ENST00000326470 RUVBL2Q9Y230 463 aaKnown RBP16.98■□□□□ 0.31
SSH1-201ENST00000326470 PPEF2O14830 753 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 PHGDHO43175 533 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 ZNF189O75820 626 aaPredicted RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 CSPG5O95196 566 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 ADORA2BP29275 332 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 NPY2RP49146 381 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 SAMD7Q7Z3H4 446 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 ZC3HC1Q86WB0 502 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 FSTL5Q8N475 847 aaPredicted RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 FNDC8Q8TC99 324 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 PLEKHG4BQ96PX9 1271 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 PHF12Q96QT6 1004 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 PCDHAC1Q9H158 963 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 CHRAC1Q9NRG0 131 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 SETD4Q9NVD3 440 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 ERI2A8K979 691 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 KCNU1A8MYU2 1149 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 XPO1O14980 1071 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 DCLK1O15075 740 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 DLX3O60479 287 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 SLC35E2BP0CK96 405 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 CYP2C9P11712 490 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 DNAJB1P25685 340 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 TRAP1Q12931 704 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 SLC12A1Q13621 1099 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 USP10Q14694 798 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 TREML2Q5T2D2 321 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 KRT80Q6KB66 452 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 DUS1LQ6P1R4 473 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 GK5Q6ZS86 529 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 CROCCP3Q8IVE0 287 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 PCDH20Q8N6Y1 951 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 HM13Q8TCT9 377 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 GRIN3AQ8TCU5 1115 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 KCTD4Q8WVF5 259 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 DUS3LQ96G46 650 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 RMND5BQ96G75 393 aaPredicted RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 HSFY1Q96LI6 401 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 UHRF1Q96T88 793 aaPredicted RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 SLC29A1Q99808 456 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 TRPV6Q9H1D0 765 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 RHOJQ9H4E5 214 aa16.97■□□□□ 0.31
SSH1-201ENST00000326470 LIN28AQ9H9Z2 209 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 IPO11Q9UI26 975 aaKnown RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.97■□□□□ 0.31
SSH1-201ENST00000326470 BRCA1P38398 1863 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms