RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 RAG1P15918 1043 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 VCLP18206 1134 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 PIK3R1P27986 724 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 IRF9Q00978 393 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 SNX17Q15036 470 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 CERCAMQ5T4B2 595 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 SEL1L3Q68CR1 1132 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 OXCT2Q9BYC2 517 aaPredicted RBP20.21■□□□□ 0.83
SOX2-201ENST00000325404 SLC4A7Q9Y6M7 1214 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 C17orf102A2RUQ5 167 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 EME2A4GXA9 379 aaPredicted RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 NRP1O14786 923 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 TREHO43280 583 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ZCCHC18P0CG32 403 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 OLIG2Q13516 323 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 UGP2Q16851 508 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ZFP1Q6P2D0 407 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 CCDC117Q8IWD4 279 aaPredicted RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 KYQ8NBH2 561 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 TRPV1Q8NER1 839 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 PDCD6IPQ8WUM4 868 aaKnown RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 OR52B2Q96RD2 323 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 EPAS1Q99814 870 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ULBP1Q9BZM6 244 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ARHGAP39Q9C0H5 1083 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 GPBP1L1Q9HC44 474 aaPredicted RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 ALDH1A1P00352 501 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 NFKB1P19838 968 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ERFP50548 548 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 COG7P83436 770 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 PURAQ00577 322 aaKnown RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 LIN52Q52LA3 116 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 MFSD14CQ5VZR4 134 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ZC3HC1Q86WB0 502 aaKnown RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 CNTN4Q8IWV2 1026 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 NPWQ8N729 165 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 ZSCAN18Q8TBC5 510 aaPredicted RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 STYXQ8WUJ0 223 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 CCDC124Q96CT7 223 aaKnown RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 MED10Q9BTT4 135 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 CAB39LQ9H9S4 337 aa20.2■□□□□ 0.82
SOX2-201ENST00000325404 IARS2Q9NSE4 1012 aaKnown RBP20.2■□□□□ 0.82
SOX2-201ENST00000325404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.19■□□□□ 0.82
SOX2-201ENST00000325404 DDHD2O94830 711 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 GMPRP36959 345 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 ZBTB17Q13105 803 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 DLG2Q15700 870 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 TMEM86AQ8N2M4 240 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 ATXN7L3BQ96GX2 97 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 GOLGA2P5Q9HBQ8 144 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 ANLNQ9NQW6 1124 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 MAN1C1Q9NR34 630 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 CHRAC1Q9NRG0 131 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 I6L893 689 aaPredicted RBP20.19■□□□□ 0.82
SOX2-201ENST00000325404 LTFP02788 710 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 PEX2P28328 305 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 CXCR3P49682 368 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 SLC12A1Q13621 1099 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 RFTN1Q14699 578 aaPredicted RBP20.19■□□□□ 0.82
SOX2-201ENST00000325404 TRIP10Q15642 601 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 LPCAT4Q643R3 524 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 DDX50Q9BQ39 737 aaKnown RBP20.19■□□□□ 0.82
SOX2-201ENST00000325404 COLEC11Q9BWP8 271 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 SHCBP1LQ9BZQ2 653 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 RNF19AQ9NV58 838 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 NDUFA13Q9P0J0 144 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 IPPQ9Y573 584 aa20.19■□□□□ 0.82
SOX2-201ENST00000325404 YJEFN3A6XGL0 299 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 TARM1B6A8C7 271 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 ATP9BO43861 1147 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 KPNA6O60684 536 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 SORBS2O94875 1100 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 CYBAP13498 195 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 TFEBP19484 476 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 PPARGP37231 505 aaPredicted RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 LHX1P48742 406 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 AQP4P55087 323 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 MAP3K7CLP57077 242 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 GRM3Q14832 879 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 RBBP5Q15291 538 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 TCHHL1Q5QJ38 904 aaPredicted RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 ARMC3Q5W041 872 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 WSCD1Q658N2 575 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 PM20D1Q6GTS8 502 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 PQLC1Q8N2U9 271 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 CATSPER1Q8NEC5 780 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 TRIB2Q92519 343 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 SPATA16Q9BXB7 569 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 TRIM4Q9C037 500 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 TASP1Q9H6P5 420 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 MRGBPQ9NV56 204 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 SLC39A10Q9ULF5 831 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 GABRQQ9UN88 632 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 PTCH2Q9Y6C5 1203 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 E2F8A0AVK6 867 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 GRID2O43424 1007 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 DENRO43583 198 aaKnown RBP20.18■□□□□ 0.82
SOX2-201ENST00000325404 TADA2AO75478 443 aa20.18■□□□□ 0.82
SOX2-201ENST00000325404 SBK3P0C264 359 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms