RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ALYREFQ86V81 257 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 MYLPFQ96A32 169 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 NFKBIZQ9BYH8 718 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 RAD21L1Q9H4I0 556 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PAX7P23759 505 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PTDSS1P48651 473 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 SCNN1GP51170 649 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 STXBP5Q5T5C0 1151 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 SYT12Q8IV01 421 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 WFS1O76024 890 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 CCDC166P0CW27 439 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TCF3P15923 654 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 GRK4P32298 578 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PFKFB4Q16877 469 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 STK32CQ86UX6 486 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 LENG9Q96B70 501 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 LRMDAQ9H2I8 198 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 ACSS3Q9H6R3 686 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 ERVK-5Q9HDB9 667 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 ENOPH1Q9UHY7 261 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 C2CD2Q9Y426 696 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 NID2Q14112 1375 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 NAA20P61599 178 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 RPL7AP62424 266 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PRKCQQ04759 706 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PLCL1Q15111 1095 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 CRY1Q16526 586 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 DGUOKQ16854 277 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 ZCCHC8Q6NZY4 707 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TSHZ1Q6ZSZ6 1077 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PALB2Q86YC2 1186 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 NKAPQ8N5F7 415 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 C19orf18Q8NEA5 215 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 STAG3L4Q8TBR4 150 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TBC1D10AQ9BXI6 508 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 DDX18Q9NVP1 670 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM25AB3EWG3 89 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM25CB3EWG5 89 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM25GB3EWG6 89 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 H3BMM5 538 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 ALOX15BO15296 676 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PPP1R11O60927 126 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 SNRPB2P08579 225 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 DARSP14868 501 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 ATP5F1P24539 256 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 WEE1P30291 646 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 S100A3P33764 101 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TSNQ15631 228 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PHKG1Q16816 387 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 RAP1GAP2Q684P5 730 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TATDN1Q6P1N9 297 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 LRRN4Q8WUT4 740 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 FGFBP2Q9BYJ0 223 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 CDH19Q9H159 772 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 OSGEPL1Q9H4B0 414 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TK2O00142 265 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 JAM2P57087 298 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 TOP3AQ13472 1001 aaPredicted RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 DGKZQ13574 1117 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 BNIPLQ7Z465 357 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 DEFB132Q7Z7B7 95 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 SH3GL2Q99962 352 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ZCCHC2Q9C0B9 1178 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 PHACTR1Q9C0D0 580 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 KPNA4O00629 521 aaPredicted RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 TRIM38O00635 465 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 EPN2O95208 641 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 COX7A2P14406 83 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ZACNQ401N2 412 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 USP45Q70EL2 814 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 C10orf107Q8IVU9 208 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 SYTL1Q8IYJ3 562 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF614Q8N883 585 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 KCTD4Q8WVF5 259 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 GAD1Q99259 594 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPL57Q9BQC6 102 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ROGDIQ9GZN7 287 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 LINC00854A0A1B0GVQ3 168 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 LIPMQ5VYY2 423 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 USP50Q70EL3 339 aaPredicted RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 PTGR2Q8N8N7 351 aaPredicted RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 RP9Q8TA86 221 aaKnown RBP11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 GRIP2Q9C0E4 1043 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ZDHHC6Q9H6R6 413 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 SMPD4Q9NXE4 827 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 TMEM216Q9P0N5 145 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 NUDT5Q9UKK9 219 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 A0A087WXM4 84 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 ZMPSTE24O75844 475 aa11.04□□□□□ -0.64
SNRNP200-201ENST00000323853 TUFMP49411 452 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms