RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 PPHLN1Q8NEY8 458 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 IRGQQ8WZA9 623 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 MAML1Q92585 1016 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 RUBCNQ92622 972 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 ZFYVE19Q96K21 471 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 C8orf48Q96LL4 319 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 SLC2A13Q96QE2 648 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 TGS1Q96RS0 853 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 CYLDQ9NQC7 956 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 CDH22Q9UJ99 828 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 CRYL1Q9Y2S2 319 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 FCF1Q9Y324 198 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 GMNCA6NCL1 334 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 DNAJC6O75061 913 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 ITGB6P18564 788 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 GKP32189 559 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 GMPRP36959 345 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 DRG2P55039 364 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 USP4Q13107 963 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 PABPC1LQ4VXU2 614 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 ATXN7L2Q5T6C5 722 aaPredicted RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 PRPF39Q86UA1 669 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 VSIG1Q86XK7 387 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 ALKBH8Q96BT7 664 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 SEC16BQ96JE7 1060 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 TMEM175Q9BSA9 504 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 GPR63Q9BZJ6 419 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 UBA2Q9UBT2 640 aaPredicted RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 MCM8Q9UJA3 840 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 TRAV19A0A0A6YYK7 116 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 PHGDHO43175 533 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 ANXA9O76027 345 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 WASP42768 502 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 WNT3AP56704 352 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 C9orf50Q5SZB4 431 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 LRIG3Q6UXM1 1119 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 CCDC149Q6ZUS6 474 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
ZNF543-201ENST00000321545 RAD9AQ99638 391 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 SMOC2Q9H3U7 446 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 MTRRQ9UBK8 725 aa11.53□□□□□ -0.56
ZNF543-201ENST00000321545 WDR81Q562E7 1941 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 ARID2Q68CP9 1835 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 HHLA1C9JL84 531 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 I6L893 689 aaPredicted RBP11.52□□□□□ -0.56
ZNF543-201ENST00000321545 STK25O00506 426 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 MTSS1O43312 755 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 NNMTP40261 264 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 ABL2P42684 1182 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 PTPRCAPQ14761 206 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 CRYMQ14894 314 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 TRIP4Q15650 581 aaPredicted RBP11.52□□□□□ -0.56
ZNF543-201ENST00000321545 PARP6Q2NL67 630 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 ZRANB3Q5FWF4 1079 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 PSRC1Q6PGN9 363 aaPredicted RBP11.52□□□□□ -0.56
ZNF543-201ENST00000321545 RHBDF2Q6PJF5 856 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 YAF2Q8IY57 180 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 SLC43A3Q8NBI5 491 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 CCDC197Q8NCU1 140 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 ELMO2Q96JJ3 720 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 QKIQ96PU8 341 aaKnown RBP eCLIP11.52□□□□□ -0.56
ZNF543-201ENST00000321545 PITPNM3Q9BZ71 974 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 CAB39LQ9H9S4 337 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 SSX2IPQ9Y2D8 614 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 PCDHB9Q9Y5E1 797 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 WNT6Q9Y6F9 365 aa11.52□□□□□ -0.56
ZNF543-201ENST00000321545 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 GRM6O15303 877 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 NCAM2O15394 837 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 GJB3O75712 270 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 SERPINF2P08697 491 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 SCTRP47872 440 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 TCEAL1Q15170 157 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 TEAD2Q15562 447 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 MUM1Q2TAK8 710 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 PREPLQ4J6C6 727 aaPredicted RBP11.52□□□□□ -0.57
ZNF543-201ENST00000321545 FASTKD1Q53R41 847 aaKnown RBP11.52□□□□□ -0.57
ZNF543-201ENST00000321545 CMC1Q7Z7K0 106 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 SH3RF2Q8TEC5 729 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 GDPD5Q8WTR4 605 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 DDX50Q9BQ39 737 aaKnown RBP11.52□□□□□ -0.57
ZNF543-201ENST00000321545 ADAM7Q9H2U9 754 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 TLR9Q9NR96 1032 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 TLR6Q9Y2C9 796 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 A0A0G2JMZ2 1700 aa11.52□□□□□ -0.57
ZNF543-201ENST00000321545 ZNF840PA6NDX5 716 aa11.51□□□□□ -0.57
ZNF543-201ENST00000321545 EFCAB14O75071 495 aa11.51□□□□□ -0.57
ZNF543-201ENST00000321545 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
ZNF543-201ENST00000321545 NXNQ6DKJ4 435 aa11.51□□□□□ -0.57
ZNF543-201ENST00000321545 ZNF470Q6ECI4 717 aa11.51□□□□□ -0.57
ZNF543-201ENST00000321545 ZNF449Q6P9G9 518 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms