RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 ZFP28Q8NHY6 868 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 CHPT1Q8WUD6 406 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 MAML1Q92585 1016 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 ARHGEF2Q92974 986 aaKnown RBP10.06□□□□□ -0.8
KARS-202ENST00000319410 SLC35C1Q96A29 364 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 HPDLQ96IR7 371 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 LRRC37BQ96QE4 947 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 TUBB6Q9BUF5 446 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 PRKD2Q9BZL6 878 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 RBM38Q9H0Z9 239 aaKnown RBP10.06□□□□□ -0.8
KARS-202ENST00000319410 HCFC1R1Q9NWW0 138 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 KLHL42Q9P2K6 505 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 KCNN3Q9UGI6 736 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 DPP7Q9UHL4 492 aa10.06□□□□□ -0.8
KARS-202ENST00000319410 APOBEC2Q9Y235 224 aaKnown RBP10.06□□□□□ -0.8
KARS-202ENST00000319410 ZSCAN5CA6NGD5 496 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 TCP11X1B4DZS4 312 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 RGS13O14921 159 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 CST3P01034 146 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 FUCA1P04066 466 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 BTF3P20290 206 aaKnown RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 CBX5P45973 191 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 XIAPP98170 497 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 PPP2R2BQ00005 443 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 CETN1Q12798 172 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 NCOA4Q13772 614 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 SPA17Q15506 151 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 PPM1LQ5SGD2 360 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 VARS2Q5ST30 1063 aaKnown RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 LIN9Q5TKA1 542 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 CDKAL1Q5VV42 579 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 ELMSAN1Q6PJG2 1045 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 METTL23Q86XA0 190 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 SNX32Q86XE0 403 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 CENPSQ8N2Z9 138 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 SLC7A6OSQ96CW6 309 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 MRPL1Q9BYD6 325 aaKnown RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 LACRTQ9GZZ8 138 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 DDX47Q9H0S4 455 aaKnown RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 SCPEP1Q9HB40 452 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 SCINQ9Y6U3 715 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 DMDP11532 3685 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 OR6C75A6NL08 312 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 CYB561D2O14569 222 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 RGS16O15492 202 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 HUS1O60921 280 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 KRT36O76013 467 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 PAPLNO95428 1278 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 VNN1O95497 513 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 KRT19P08727 400 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 EEF1GP26641 437 aaKnown RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 RCVRNP35243 200 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 KPNA1P52294 538 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 RAB33AQ14088 237 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 CNGA2Q16280 664 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 NFE2Q16621 373 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 ZNF829Q3KNS6 432 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 SLC8B1Q6J4K2 584 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 BMP8AQ7Z5Y6 402 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 KRT77Q7Z794 578 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 IRF2BP1Q8IU81 584 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 PRSS33Q8NF86 280 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 PHOX2BQ99453 314 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 KRT12Q99456 494 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 RNF38Q9H0F5 515 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 XYLT2Q9H1B5 865 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 MYLK2Q9H1R3 596 aa10.05□□□□□ -0.8
KARS-202ENST00000319410 TIMM13Q9Y5L4 95 aaPredicted RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
KARS-202ENST00000319410 GOLGA8QA0A0J9YX86 632 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 GOLGA8OA6NCC3 632 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 GOLGA8NF8WBI6 632 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 GOLGA8RI6L899 631 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 DDX3XO00571 662 aaKnown RBP eCLIP10.04□□□□□ -0.81e-29■■■□□ 18.6
KARS-202ENST00000319410 RNASEH2AO75792 299 aaKnown RBP10.04□□□□□ -0.8
KARS-202ENST00000319410 ASS1P00966 412 aaKnown RBP10.04□□□□□ -0.8
KARS-202ENST00000319410 S100A6P06703 90 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 TARSP26639 723 aaKnown RBP10.04□□□□□ -0.8
KARS-202ENST00000319410 SLC5A2P31639 672 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 IFNAR2P48551 515 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 LHX1P48742 406 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 CENPAP49450 140 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 MAP3K7CLP57077 242 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 CDR2Q01850 454 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 YWHAHQ04917 246 aaPredicted RBP10.04□□□□□ -0.8
KARS-202ENST00000319410 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 PTK2BQ14289 1009 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 RGS21Q2M5E4 152 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 ACSBG2Q5FVE4 666 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 UBALD2Q8IYN6 164 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 THEM5Q8N1Q8 247 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 ARL6IP6Q8N6S5 226 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 PCYOX1LQ8NBM8 494 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 FBXL13Q8NEE6 735 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
KARS-202ENST00000319410 MRPS26Q9BYN8 205 aaKnown RBP10.04□□□□□ -0.8
KARS-202ENST00000319410 NEK6Q9HC98 313 aa10.04□□□□□ -0.8
KARS-202ENST00000319410 MAD1L1Q9Y6D9 718 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms