RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 STAP1Q9ULZ2 295 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 COPG1Q9Y678 874 aaKnown RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 FNDC1Q4ZHG4 1894 aaPredicted RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 M0QYT0 321 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 PIRO00625 290 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 TRIM38O00635 465 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 MTSS1O43312 755 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 JUNP05412 331 aaKnown RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 HOXA11P31270 313 aaPredicted RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 AIF1P55008 147 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 NR1H2P55055 460 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 EN1Q05925 392 aaPredicted RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 LAMC2Q13753 1193 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 KCTD2Q14681 263 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 IRGQQ8WZA9 623 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 WNT8BQ93098 351 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 TSNARE1Q96NA8 513 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 TXNRD2Q9NNW7 524 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 ACSS2Q9NR19 701 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 GDAP2Q9NXN4 497 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 ARHGAP10A1A4S6 786 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 STX16-NPEPL1H3BU86 382 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 RNASEH2AO75792 299 aaKnown RBP19.39■□□□□ 0.69
RTN4-201ENST00000317610 VAPBO95292 243 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 SLC35E2BP0CK96 405 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 ZNF26P17031 533 aaPredicted RBP19.39■□□□□ 0.69
RTN4-201ENST00000317610 SLC12A1Q13621 1099 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 PPP2R5DQ14738 602 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
RTN4-201ENST00000317610 FBXO47Q5MNV8 452 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 SH2D4BQ5SQS7 431 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 CENPLQ8N0S6 344 aaPredicted RBP19.39■□□□□ 0.69
RTN4-201ENST00000317610 KDM1BQ8NB78 822 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 NTAN1Q96AB6 310 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 SNX25Q9H3E2 840 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 PIGVQ9NUD9 493 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 OTOFQ9HC10 1997 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 FAM72CH0Y354 149 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 ATP6V1B1P15313 513 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 NMBRP28336 390 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 ADRA1BP35368 520 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 HCAR3P49019 387 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 SCAPQ12770 1279 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 FAM72AQ5TYM5 149 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 ITPRIPL1Q6GPH6 555 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 FAM72DQ6L9T8 149 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 IYDQ6PHW0 289 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 FAM72BQ86X60 149 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 CHERPQ8IWX8 916 aaKnown RBP19.39■□□□□ 0.69
RTN4-201ENST00000317610 FSTL5Q8N475 847 aaPredicted RBP19.39■□□□□ 0.69
RTN4-201ENST00000317610 HDAC11Q96DB2 347 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 ASB9Q96DX5 294 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 KIFC1Q9BW19 673 aa19.39■□□□□ 0.69
RTN4-201ENST00000317610 SYNJ2BP-COX16A0A087WUM0 186 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 SPTLC1O15269 473 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 DLX3O60479 287 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 C8BP07358 591 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 ZBTB17Q13105 803 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 USP10Q14694 798 aaKnown RBP19.38■□□□□ 0.69
RTN4-201ENST00000317610 GLRA4Q5JXX5 417 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 SYPL2Q5VXT5 272 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 NXNQ6DKJ4 435 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 LRRC8EQ6NSJ5 796 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 SLC27A1Q6PCB7 646 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 ISLR2Q6UXK2 745 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 RNF148Q8N7C7 305 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 KCTD4Q8WVF5 259 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 KCTD13Q8WZ19 329 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 HNRNPABQ99729 332 aaKnown RBP19.38■□□□□ 0.69
RTN4-201ENST00000317610 DUSP16Q9BY84 665 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 COX16Q9P0S2 106 aa19.38■□□□□ 0.69
RTN4-201ENST00000317610 SUCOQ9UBS9 1254 aaKnown RBP19.38■□□□□ 0.69
RTN4-201ENST00000317610 UBQLN1Q9UMX0 589 aaKnown RBP19.38■□□□□ 0.69
RTN4-201ENST00000317610 RUVBL2Q9Y230 463 aaKnown RBP19.38■□□□□ 0.69
RTN4-201ENST00000317610 A0A0G2JLL6 359 aaPredicted RBP19.37■□□□□ 0.69
RTN4-201ENST00000317610 AP3B1O00203 1094 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 PHGDHO43175 533 aaKnown RBP19.37■□□□□ 0.69
RTN4-201ENST00000317610 NPHS1O60500 1241 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 RANBP1P43487 201 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 Q3C1V9 767 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 MGAT5BQ3V5L5 792 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 ZNF618Q5T7W0 954 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 PRRT2Q7Z6L0 340 aaPredicted RBP19.37■□□□□ 0.69
RTN4-201ENST00000317610 KLHDC8BQ8IXV7 354 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 PELI3Q8N2H9 469 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 GALNT4Q8N4A0 578 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 NPWQ8N729 165 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 RNF169Q8NCN4 708 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 TOP1MTQ969P6 601 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 SCYL1Q96KG9 808 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 GPR78Q96P69 363 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 VAT1Q99536 393 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
RTN4-201ENST00000317610 LRRC4Q9HBW1 653 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 TIMMDC1Q9NPL8 285 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 RBPJLQ9UBG7 517 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 MYOCOSA0A1B0GUC4 107 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 UNCXA6NJT0 531 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 NFKB1P19838 968 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 DNAJB2P25686 324 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms