RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ANLNQ9NQW6 1124 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 RIC8BQ9NVN3 520 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MTF2Q9Y483 593 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NRP2O60462 931 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PTPN1P18031 435 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 EEF1DP29692 281 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GLUD2P49448 558 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BMXP51813 675 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NR1D2Q14995 579 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NRF1Q16656 503 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BSPRYQ5W0U4 402 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 FSTL4Q6MZW2 842 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SCARA5Q6ZMJ2 495 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 KIAA0408Q6ZU52 694 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CCDC60Q8IWA6 550 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TBC1D21Q8IYX1 336 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 COLGALT1Q8NBJ5 622 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 SHCBP1Q8NEM2 672 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB45Q96K62 511 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 RDH12Q96NR8 316 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GPN2Q9H9Y4 310 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MOV10Q9HCE1 1003 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 STAP1Q9ULZ2 295 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CLEC11AQ9Y240 323 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 FAM32AQ9Y421 112 aaKnown RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 C9IYK1 514 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BOLA2-SMG1P6H3BVE0 249 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 K7EPI3 171 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 NEMP1O14524 444 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MSCO60682 206 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MGAT1P26572 445 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PLOD1Q02809 727 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CDH17Q12864 832 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GRIK2Q13002 908 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 BAATQ14032 418 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 OXA1LQ15070 435 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TBCELQ5QJ74 424 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 PRR23CQ6ZRP0 262 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 EEPD1Q7L9B9 569 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CBR4Q8N4T8 237 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 LZTR1Q8N653 840 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ATP6V1E2Q96A05 226 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CCDC97Q96F63 343 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CIB1Q99828 191 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 CORO1BQ9BR76 489 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 IL22Q9GZX6 179 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GBA2Q9HCG7 927 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM45AQ9NWC5 275 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 GTF2IRD1Q9UHL9 959 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TRPC5Q9UL62 973 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 TNFSF13BQ9Y275 285 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 ATP11BQ9Y2G3 1177 aa4.85□□□□□ -1.63
PTPN13-201ENST00000316707 MAFBQ9Y5Q3 323 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-201ENST00000316707 DHRS12A0PJE2 317 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 CSPG5O95196 566 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 INHBBP09529 407 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 HOXC6P09630 235 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 TAL1P17542 331 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A6P19224 532 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A1P22309 533 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A4P22310 534 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A3P35503 534 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 UGT1A5P35504 534 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 HSPA2P54652 639 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 KCNC4Q03721 635 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 GBE1Q04446 702 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 USP10Q14694 798 aaKnown RBP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 DGKDQ16760 1214 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 LRRC8EQ6NSJ5 796 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 FAM45BPQ6NSW5 357 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 DCLRE1AQ6PJP8 1040 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 STRADAQ7RTN6 431 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 PID1Q7Z2X4 250 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 EFL1Q7Z2Z2 1120 aaKnown RBP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 UNC93AQ86WB7 457 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 RNF148Q8N7C7 305 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 TRPV3Q8NET8 790 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 FAM45AQ8TCE6 357 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 LRTOMTQ8WZ04 291 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 GPR22Q99680 433 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 SLC29A1Q99808 456 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 MRPL57Q9BQC6 102 aaKnown RBP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 BEGAINQ9BUH8 593 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 MROQ9BYG7 248 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 HPS4Q9NQG7 708 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 LAMB2P55268 1798 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 SPATA31C2B4DYI2 1134 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 MAFO75444 373 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 KATNA1O75449 491 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 PDGFRBP09619 1106 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 HSD17B1P14061 328 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 ICAM3P32942 547 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 AIF1P55008 147 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 NSUN2Q08J23 767 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 KRR1Q13601 381 aaKnown RBP4.84□□□□□ -1.63
PTPN13-201ENST00000316707 CAPSQ13938 189 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 SLC27A3Q5K4L6 730 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 CMC1Q7Z7K0 106 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 EFCAB3Q8N7B9 438 aa4.84□□□□□ -1.63
PTPN13-201ENST00000316707 RNF169Q8NCN4 708 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms