RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SERINC3Q13530 473 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 ENPP2Q13822 863 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 PDK2Q15119 407 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 HNRNPA1L2Q32P51 320 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 HSF5Q4G112 596 aaPredicted RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 KAZNQ674X7 775 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 NCBP2-AS2Q69YL0 99 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 AADACL2Q6P093 401 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 NPNTQ6UXI9 565 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 ZNF783Q6ZMS7 281 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 Q6ZVU0 165 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 B4GALNT4Q76KP1 1039 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 CCDC50Q8IVM0 306 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 MAP7D3Q8IWC1 876 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 TXLNBQ8N3L3 684 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 SH2D3CQ8N5H7 860 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 PQLC3Q8N755 202 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 FAM71BQ8TC56 605 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 ATOH1Q92858 354 aaPredicted RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 PPP1R9BQ96SB3 815 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 ACE2Q9BYF1 805 aaPredicted RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 TM6SF2Q9BZW4 377 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 MKRN2Q9H000 416 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 CD248Q9HCU0 757 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 TRMT1Q9NXH9 659 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 FBXO4Q9UKT5 387 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 PYCARDQ9ULZ3 195 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 MYO18AQ92614 2054 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 EDDM13A0A1B0GTR0 161 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ARHGAP42A6NI28 874 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 C3orf80F5H4A9 247 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 RNF103O00237 685 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PLK4O00444 970 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 NPC1O15118 1278 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 MAP3K7O43318 606 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 KRT86O43790 486 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ATP9BO43861 1147 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ALDH1A2O94788 518 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PAPSS2O95340 614 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 CTNNA1P35221 906 aaKnown RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 NNMTP40261 264 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PSMD8P48556 350 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 SERPINH1P50454 418 aaKnown RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 ZNF135P52742 658 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 NDST2P52849 883 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 METAP1P53582 386 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 COPAP53621 1224 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 YBEYP58557 167 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 GBE1Q04446 702 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ADCY2Q08462 1091 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 CCDC173Q0VFZ6 552 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 CAMK2GQ13555 558 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 LPAL2Q16609 132 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 IFI16Q16666 785 aaKnown RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 POM121L1PQ3SYA9 428 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PARP15Q460N3 678 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ATXN7L2Q5T6C5 722 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 C9orf64Q5T6V5 341 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 LRRC38Q5VT99 294 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 AFMIDQ63HM1 303 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 RETSATQ6NUM9 610 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 C22orf39Q6P5X5 142 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 SPOCD1Q6ZMY3 1216 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ZNF662Q6ZS27 426 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PEX26Q7Z412 305 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 NT5DC3Q86UY8 548 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 FAM124AQ86V42 546 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 TMPRSS6Q8IU80 811 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 RYBPQ8N488 228 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 FAM160A2Q8N612 972 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 CHST14Q8NCH0 376 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 OR6K2Q8NGY2 324 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 OR2T3Q8NH03 318 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 FRS2Q8WU20 508 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ALG3Q92685 438 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PTPRN2Q92932 1015 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 HAUS1Q96CS2 278 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 FAF2Q96CS3 445 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 EXOC2Q96KP1 924 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 RNF157Q96PX1 679 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 ZNF670Q9BS34 389 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 HERPUD2Q9BSE4 406 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 HEMGNQ9BXL5 484 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 MAK16Q9BXY0 300 aaKnown RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 TSGA10Q9BZW7 698 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 RCOR3Q9P2K3 495 aaPredicted RBP8.01□□□□□ -1.13
CDC42-201ENST00000315554 EBF1Q9UH73 591 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 SUN2Q9UH99 717 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 AMFRQ9UKV5 643 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 HPCAL4Q9UM19 191 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 CYP8B1Q9UNU6 501 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 HS3ST2Q9Y278 367 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 MUC6Q6W4X9 2439 aa8.01□□□□□ -1.13
CDC42-201ENST00000315554 TTC24A2A3L6 582 aaPredicted RBP8□□□□□ -1.13
CDC42-201ENST00000315554 USP27XA6NNY8 438 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms