RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C10orf82Q8WW14 230 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF689Q96CS4 500 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-201ENST00000315286 ATXN7L3BQ96GX2 97 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 FSD1LQ9BXM9 530 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 IARS2Q9NSE4 1012 aaKnown RBP18.65■□□□□ 0.58
CCDC43-201ENST00000315286 USH1CQ9Y6N9 552 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 RAMP2O60895 175 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 GSTA1P08263 222 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 SPRP35270 261 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-201ENST00000315286 DEFB103AP81534 67 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 SNX30Q5VWJ9 437 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 C16orf46Q6P387 395 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 CFAP52Q8N1V2 620 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 DCLK2Q8N568 766 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 CDK5RAP1Q96SZ6 601 aaKnown RBP18.65■□□□□ 0.58
CCDC43-201ENST00000315286 NACA2Q9H009 215 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 MIA3Q5JRA6 1907 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 KLF11O14901 512 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 CLTBP09497 229 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 TYK2P29597 1187 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 SLC6A4P31645 630 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ACVRL1P37023 503 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 CHRNA4P43681 627 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 LIMK2P53671 638 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 WNT3AP56704 352 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ITKQ08881 620 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 MPP3Q13368 585 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 PCSK7Q16549 785 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 FYB2Q5VWT5 728 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 FSTL4Q6MZW2 842 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 RFWD3Q6PCD5 774 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 KDELC1Q6UW63 502 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 LGI2Q8N0V4 545 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 PDZD8Q8NEN9 1154 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 IMP4Q96G21 291 aaKnown RBP18.64■□□□□ 0.57
CCDC43-201ENST00000315286 TMEM169Q96HH4 297 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ZNF558Q96NG5 402 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 SIRPGQ9P1W8 387 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 PCDH10Q9P2E7 1040 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 EMCNQ9ULC0 261 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 F5H5T6 163 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 H0YHG0 523 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 COCHO43405 550 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ACSL4O60488 711 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ITGB8P26012 769 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 GMPRP36959 345 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ABCG1P45844 678 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 NUMBP49757 651 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 IRX4P78413 519 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 DSG1Q02413 1049 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 SERINC3Q13530 473 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 IHHQ14623 411 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 PARP15Q460N3 678 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 HECTD3Q5T447 861 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 CES4AQ5XG92 561 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 KYAT3Q6YP21 454 aaKnown RBP18.64■□□□□ 0.57
CCDC43-201ENST00000315286 CMC1Q7Z7K0 106 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 NUDCD3Q8IVD9 361 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 TEX26Q8N6G2 289 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 GBP7Q8N8V2 638 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-201ENST00000315286 RFWD2Q8NHY2 731 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 OVCA2Q8WZ82 227 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 DCDC2Q9UHG0 476 aa18.64■□□□□ 0.57
CCDC43-201ENST00000315286 MTO1Q9Y2Z2 717 aaKnown RBP18.64■□□□□ 0.57
CCDC43-201ENST00000315286 ABHD14A-ACY1A0A1B0GW23 586 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 TTC24A2A3L6 582 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-201ENST00000315286 GLRA3O75311 464 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 GSRP00390 522 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 BPGMP07738 259 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 TROVE2P10155 538 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC43-201ENST00000315286 BNIP1Q12981 228 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 MTA1Q13330 715 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 STXBP5Q5T5C0 1151 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 N4BP2L1Q5TBK1 243 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-201ENST00000315286 PDPK2PQ6A1A2 396 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 ESRP1Q6NXG1 681 aaKnown RBP18.63■□□□□ 0.57
CCDC43-201ENST00000315286 POTEHQ6S545 545 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 CCDC117Q8IWD4 279 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-201ENST00000315286 E2F7Q96AV8 911 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 MCMBPQ9BTE3 642 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 SNX15Q9NRS6 342 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 DCTN4Q9UJW0 460 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 CHKBQ9Y259 395 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
CCDC43-201ENST00000315286 LAMA2P24043 3122 aaKnown RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 MMP2P08253 660 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 RFC2P35250 354 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 CD86P42081 329 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 MAPKAPK2P49137 400 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 HARS2P49590 506 aaKnown RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 YBEYP58557 167 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-201ENST00000315286 DSC2Q02487 901 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 IL10RBQ08334 325 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 CHI3L2Q15782 390 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 C5orf22Q49AR2 442 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 TPGS2Q68CL5 300 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 TRIM42Q8IWZ5 723 aa18.62■□□□□ 0.57
CCDC43-201ENST00000315286 PGBD5Q8N414 524 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms