RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MPLP40238 635 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 MAPKAPK2P49137 400 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 OXCT1P55809 520 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 IRX4P78413 519 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 SLC10A2Q12908 348 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 SERINC3Q13530 473 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 PTPRRQ15256 657 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 AADACL2Q6P093 401 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 UMODL1-AS1Q8N2C9 162 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 HDDC3Q8N4P3 179 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 PQLC3Q8N755 202 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 TSEN2Q8NCE0 465 aaKnown RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 PIP4K2CQ8TBX8 421 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 KRT35Q92764 455 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 KLK6Q92876 244 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 SEMA4AQ9H3S1 761 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 PDFQ9HBH1 243 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 UVRAGQ9P2Y5 699 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 SAE1Q9UBE0 346 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-201ENST00000311943 SUN2Q9UH99 717 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 WASF2Q9Y6W5 498 aa12.28□□□□□ -0.44
SCFD1-201ENST00000311943 C3orf70A6NLC5 250 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 WASH4PA8MWX3 477 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 MFSD11O43934 449 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 LEFTY1O75610 366 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 TMCC1O94876 653 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 DNTTP04053 509 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 NNMTP40261 264 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 TAS2R38P59533 333 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 PPP2CBP62714 309 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 PPP2CAP67775 309 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 KRT83P78385 493 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 SULT2A1Q06520 285 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 CNTN1Q12860 1018 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 MTA1Q13330 715 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 KCTD19Q17RG1 926 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 ZNF776Q68DI1 518 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 LAIR1Q6GTX8 287 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 NPNTQ6UXI9 565 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 RYBPQ8N488 228 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 HERPUD2Q9BSE4 406 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 MIR1-1HGQ9H1L0 117 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 MAGEH1Q9H213 219 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 PABPC3Q9H361 631 aaKnown RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 EVLQ9UI08 416 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 EIF2B4Q9UI10 523 aaKnown RBP12.27□□□□□ -0.44
SCFD1-201ENST00000311943 RAB23Q9ULC3 237 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 ITM2BQ9Y287 266 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 CA5BQ9Y2D0 317 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 ALG6Q9Y672 507 aa12.27□□□□□ -0.44
SCFD1-201ENST00000311943 BCLAF3A2AJT9 711 aaKnown RBP12.27□□□□□ -0.45
SCFD1-201ENST00000311943 KPNA3O00505 521 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-201ENST00000311943 KCNK3O14649 394 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 MCF2LO15068 1137 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 NPC1O15118 1278 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 PRKCGP05129 697 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 KRT10P13645 584 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 CDC25BP30305 580 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 MAT2AP31153 395 aaKnown RBP12.27□□□□□ -0.45
SCFD1-201ENST00000311943 CHRNA3P32297 505 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 GBE1Q04446 702 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 SLC10A7Q0GE19 358 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 KRT81Q14533 505 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
SCFD1-201ENST00000311943 IHHQ14623 411 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 ZFYVE27Q5T4F4 411 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 AFMIDQ63HM1 303 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 NCBP2-AS2Q69YL0 99 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 NCEH1Q6PIU2 408 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 ZNF557Q8N988 423 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-201ENST00000311943 SNX19Q92543 992 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 BIRC7Q96CA5 298 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 ZDHHC6Q9H6R6 413 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 GRPEL1Q9HAV7 217 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 LHX3Q9UBR4 397 aa12.27□□□□□ -0.45
SCFD1-201ENST00000311943 PACSIN2Q9UNF0 486 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-201ENST00000311943 PLXND1Q9Y4D7 1925 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 A0A0U1RQS6 177 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 TARSL2A2RTX5 802 aaKnown RBP12.26□□□□□ -0.45
SCFD1-201ENST00000311943 EPN2O95208 641 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 PIGNO95427 931 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 PEX11BO96011 259 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 RETP07949 1114 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 AIF1P55008 147 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 MAXP61244 160 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 ELF2Q15723 593 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 BOLA3Q53S33 107 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 PLA2G2CQ5R387 149 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 PRAMEF14Q5SWL7 426 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 DCAF12L1Q5VU92 463 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 LPCAT2Q7L5N7 544 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 TMTC1Q8IUR5 882 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 RGL4Q8IZJ4 473 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 PGBD5Q8N414 524 aa12.26□□□□□ -0.45
SCFD1-201ENST00000311943 KCTD6Q8NC69 237 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms