RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TCEAL1Q15170 157 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 CYP4V2Q6ZWL3 525 aaPredicted RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 RHOT1Q8IXI2 618 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 HDDC3Q8N4P3 179 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 CADM4Q8NFZ8 388 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 SNX19Q92543 992 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 PIGKQ92643 395 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 ISG20Q96AZ6 181 aaKnown RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 GDAP1L1Q96MZ0 367 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 MAK16Q9BXY0 300 aaKnown RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 TNKS2Q9H2K2 1166 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 VPS45Q9NRW7 570 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 DDX56Q9NY93 547 aaKnown RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 WSB2Q9NYS7 404 aaPredicted RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 FCF1Q9Y324 198 aaKnown RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 A0A1W2PP55 124 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 LRRD1A4D1F6 860 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 K7ERQ8 282 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 ZMPSTE24O75844 475 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 KRT1P04264 644 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 TNNT1P13805 278 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 HOXD11P31277 338 aaPredicted RBP20.2■□□□□ 0.82
VEGFB-201ENST00000309422 CHRNA3P32297 505 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 HOXD12P35452 270 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 LMNB2Q03252 620 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 ZNF33AQ06730 810 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 SPEM2Q0P670 501 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 KIF5AQ12840 1032 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 INO80DQ53TQ3 878 aaPredicted RBP20.2■□□□□ 0.82
VEGFB-201ENST00000309422 CARD16Q5EG05 197 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 PAF1Q8N7H5 531 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 PIP4K2CQ8TBX8 421 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 GRIN3AQ8TCU5 1115 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 TM6SF2Q9BZW4 377 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 LRRC19Q9H756 370 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 KLHL11Q9NVR0 708 aa20.2■□□□□ 0.82
VEGFB-201ENST00000309422 MBD1Q9UIS9 605 aaPredicted RBP20.2■□□□□ 0.82
VEGFB-201ENST00000309422 TPX2Q9ULW0 747 aaKnown RBP20.2■□□□□ 0.82
VEGFB-201ENST00000309422 FAM47DPA6NHR8 397 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 SLC7A4O43246 635 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 NEBLO76041 1014 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 TMCC1O94876 653 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 GSRP00390 522 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 VAV2P52735 878 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 HADHBP55084 474 aaKnown RBP20.19■□□□□ 0.82
VEGFB-201ENST00000309422 CFAP58Q5T655 872 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 LRRC38Q5VT99 294 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 SYT12Q8IV01 421 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 OR2AP1Q8NGE2 309 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 HEPHQ9BQS7 1158 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 CINPQ9BW66 212 aaPredicted RBP20.19■□□□□ 0.82
VEGFB-201ENST00000309422 OSBPL1AQ9BXW6 950 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 ZDHHC6Q9H6R6 413 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 GRPEL1Q9HAV7 217 aa20.19■□□□□ 0.82
VEGFB-201ENST00000309422 FANCMQ8IYD8 2048 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 SMAD6O43541 496 aaKnown RBP20.18■□□□□ 0.82
VEGFB-201ENST00000309422 PSTPIP1O43586 416 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 PALMO75781 387 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 AMPD1P23109 780 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 PAPOLAP51003 745 aaKnown RBP20.18■□□□□ 0.82
VEGFB-201ENST00000309422 CCNHP51946 323 aaPredicted RBP20.18■□□□□ 0.82
VEGFB-201ENST00000309422 RFTN1Q14699 578 aaPredicted RBP20.18■□□□□ 0.82
VEGFB-201ENST00000309422 AASDHQ4L235 1098 aaPredicted RBP20.18■□□□□ 0.82
VEGFB-201ENST00000309422 TMCO4Q5TGY1 634 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 TXNRD3NBQ6F5E7 133 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 DAAM2Q86T65 1068 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 DEFB119Q8N690 84 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 FRMD1Q8N878 549 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 TMIEQ8NEW7 156 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 OR2A12Q8NGT7 310 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 OR14C36Q8NHC7 312 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 CEP76Q8TAP6 659 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 LRIG1Q96JA1 1093 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 SLC39A8Q9C0K1 460 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 SEMA4GQ9NTN9 838 aa20.18■□□□□ 0.82
VEGFB-201ENST00000309422 BCLAF3A2AJT9 711 aaKnown RBP20.17■□□□□ 0.82
VEGFB-201ENST00000309422 KHNYNO15037 678 aaKnown RBP20.17■□□□□ 0.82
VEGFB-201ENST00000309422 PRAMEF11O60813 436 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 MX2P20592 715 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 COMTP21964 271 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 TAS2R40P59535 323 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 IL10RBQ08334 325 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 DPYSL3Q14195 570 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 ZNF235Q14590 738 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 GRM3Q14832 879 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 CSRP2Q16527 193 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 ARTNQ5T4W7 220 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 C11orf63Q6NUN7 778 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 RAD9BQ6WBX8 426 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 LEKR1Q6ZMV7 388 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 DPY19L3Q6ZPD9 716 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 LRRC49Q8IUZ0 686 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 PLPP6Q8IY26 295 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 FAM129BQ96TA1 746 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 NUSAP1Q9BXS6 441 aaKnown RBP20.17■□□□□ 0.82
VEGFB-201ENST00000309422 TSGA10Q9BZW7 698 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 MIR1-1HGQ9H1L0 117 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 NOL6Q9H6R4 1146 aaKnown RBP20.17■□□□□ 0.82
VEGFB-201ENST00000309422 CD93Q9NPY3 652 aa20.17■□□□□ 0.82
VEGFB-201ENST00000309422 IPO11Q9UI26 975 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms