RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 LILRA6Q6PI73 481 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 TMEM135Q86UB9 458 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 CCDC117Q8IWD4 279 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 CTAGE3PQ8IX95 158 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 DENND1AQ8TEH3 1009 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 ZNF473Q8WTR7 871 aaKnown RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 ALKBH8Q96BT7 664 aaKnown RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 CHMP6Q96FZ7 201 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 PRICKLE1Q96MT3 831 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-205ENST00000307859 IL22Q9GZX6 179 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 RABEP2Q9H5N1 569 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 SP110Q9HB58 689 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
TRIM40-205ENST00000307859 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 FAM237BA0A1B0GVD1 139 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 H3BNC9 293 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 J3KR12 359 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 TGM5O43548 720 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SPAG7O75391 227 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 USP1O94782 785 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 LATS1O95835 1130 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 POLBP06746 335 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 KRT4P19013 534 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 OR1E1P30953 314 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ADRA1AP35348 466 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SERPINB9P50453 376 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CDH4P55283 916 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CDH17Q12864 832 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 LRRC14Q15048 493 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 RABGAP1LQ5R372 815 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 RFWD3Q6PCD5 774 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SH2D5Q6ZV89 423 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MGARPQ8TDB4 240 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CKAP2Q8WWK9 683 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 RAD9AQ99638 391 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 TBL1YQ9BQ87 522 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ZBED2Q9BTP6 218 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SLC25A51Q9H1U9 297 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 PDFQ9HBH1 243 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 UBP1Q9NZI7 540 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 STOML2Q9UJZ1 356 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SOX13Q9UN79 622 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 YBX2Q9Y2T7 364 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MAGEB16A2A368 324 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 UGT1A9O60656 530 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 PRAMEF11O60813 436 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 KRT37O76014 449 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ASMTLO95671 621 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MT-ND3P03897 115 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ADH1AP07327 375 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 DRD4P21917 467 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CNTFP26441 200 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ACVRL1P37023 503 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 WDR4P57081 412 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SLC18A2Q05940 514 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MGAT5Q09328 741 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SLC10A7Q0GE19 358 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MPP3Q13368 585 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 PABPC1LQ4VXU2 614 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ADGRF1Q5T601 910 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 FOXR1Q6PIV2 292 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 KDELC1Q6UW63 502 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CHST9Q7L1S5 443 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CNPY4Q8N129 248 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 BANPQ8N9N5 519 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 PHOSPHO2Q8TCD6 241 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CDKL2Q92772 493 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 MTBPQ96DY7 904 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 IMP4Q96G21 291 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 CERS2Q96G23 380 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 KLHL5Q96PQ7 755 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 APOL2Q9BQE5 337 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 LRRC3Q9BY71 257 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 UGT1A7Q9HAW7 530 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 UGT1A10Q9HAW8 530 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 UGT1A8Q9HAW9 530 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ENTPD7Q9NQZ7 604 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 GKN1Q9NS71 199 aa12.08□□□□□ -0.48
TRIM40-205ENST00000307859 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 ZFP37Q9Y6Q3 630 aaPredicted RBP12.08□□□□□ -0.48
TRIM40-205ENST00000307859 RPS6KL1Q9Y6S9 549 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms