RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CHMP2BQ9UQN3 213 aa17.84■□□□□ 0.45
KRT28-201ENST00000306658 SDR42E2A6NKP2 422 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 CPP00450 1065 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 IVLP07476 585 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 OAS2P29728 719 aaKnown RBP17.83■□□□□ 0.45
KRT28-201ENST00000306658 USP4Q13107 963 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 SPARCL1Q14515 664 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 ZNF235Q14590 738 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 ZNF77Q15935 545 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 GPR149Q86SP6 731 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.83■□□□□ 0.45
KRT28-201ENST00000306658 BHMTQ93088 406 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 OXNAD1Q96HP4 312 aaPredicted RBP17.83■□□□□ 0.45
KRT28-201ENST00000306658 SIGLEC10Q96LC7 697 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 FEM1AQ9BSK4 669 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 TMBIM4Q9HC24 238 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 UBP1Q9NZI7 540 aa17.83■□□□□ 0.45
KRT28-201ENST00000306658 UBA2Q9UBT2 640 aaPredicted RBP17.83■□□□□ 0.45
KRT28-201ENST00000306658 CBX4O00257 560 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 SLC9A3R1O14745 358 aaPredicted RBP17.83■□□□□ 0.44
KRT28-201ENST00000306658 RASGRF2O14827 1237 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 TCEA3O75764 348 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 FSHRP23945 695 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 HYAL1Q12794 435 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 MPP3Q13368 585 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 TCEAL5Q5H9L2 206 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 FSCBQ5H9T9 825 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 CCNJLQ8IV13 435 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 KIAA1958Q8N8K9 716 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 DNAAF3Q8N9W5 541 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 SPATA22Q8NHS9 363 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 EBNA1BP2Q99848 306 aaKnown RBP17.83■□□□□ 0.44
KRT28-201ENST00000306658 WDR83Q9BRX9 315 aaKnown RBP17.83■□□□□ 0.44
KRT28-201ENST00000306658 POLR1EQ9GZS1 481 aaKnown RBP17.83■□□□□ 0.44
KRT28-201ENST00000306658 CENPHQ9H3R5 247 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 ZNF576Q9H609 170 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 VPS45Q9NRW7 570 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 KIAA1522Q9P206 1035 aaPredicted RBP17.83■□□□□ 0.44
KRT28-201ENST00000306658 ZC3H7BQ9UGR2 993 aaKnown RBP17.83■□□□□ 0.44
KRT28-201ENST00000306658 SEPT3Q9UH03 358 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 VPS28Q9UK41 221 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 MAD1L1Q9Y6D9 718 aa17.83■□□□□ 0.44
KRT28-201ENST00000306658 RNF40O75150 1001 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 GSTA2P09210 222 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 SSTR1P30872 391 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 GPX6P59796 221 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 RNF43Q68DV7 783 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 ANKRD54Q6NXT1 300 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 LEKR1Q6ZMV7 388 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 CAPN12Q6ZSI9 719 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 IGDCC3Q8IVU1 814 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 OR52K1Q8NGK4 314 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 FIBINQ8TAL6 211 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 IMP4Q96G21 291 aaKnown RBP17.82■□□□□ 0.44
KRT28-201ENST00000306658 NAT9Q9BTE0 207 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 CASS4Q9NQ75 786 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 BFARQ9NZS9 450 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 LMCD1Q9NZU5 365 aa17.82■□□□□ 0.44
KRT28-201ENST00000306658 TLDC2A0PJX2 215 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 GLP2RO95838 553 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 MT-CYBP00156 380 aaPredicted RBP17.81■□□□□ 0.44
KRT28-201ENST00000306658 HOXB8P17481 243 aaPredicted RBP17.81■□□□□ 0.44
KRT28-201ENST00000306658 MZF1P28698 734 aaPredicted RBP17.81■□□□□ 0.44
KRT28-201ENST00000306658 NPY2RP49146 381 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 SESN2P58004 480 aaPredicted RBP17.81■□□□□ 0.44
KRT28-201ENST00000306658 CDH17Q12864 832 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 FYB2Q5VWT5 728 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 CASC4Q6P4E1 433 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 CHRDL2Q6WN34 429 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 AGGF1Q8N302 714 aaeCLIP17.81■□□□□ 0.44
KRT28-201ENST00000306658 ZNF557Q8N988 423 aaPredicted RBP17.81■□□□□ 0.44
KRT28-201ENST00000306658 RIN3Q8TB24 985 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 ARL8AQ96BM9 186 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 STAMBPL1Q96FJ0 436 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 TBL1YQ9BQ87 522 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 CINPQ9BW66 212 aaPredicted RBP17.81■□□□□ 0.44
KRT28-201ENST00000306658 FSD1LQ9BXM9 530 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 PPCSQ9HAB8 311 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 PLK2Q9NYY3 685 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 OR51B4Q9Y5P0 310 aa17.81■□□□□ 0.44
KRT28-201ENST00000306658 HMGB1P1B2RPK0 211 aaPredicted RBP17.8■□□□□ 0.44
KRT28-201ENST00000306658 USP12O75317 370 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 GLDCP23378 1020 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 CSKP41240 450 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 NUMBP49757 651 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 MAXP61244 160 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 SLC12A1Q13621 1099 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 LONRF1Q17RB8 773 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 POTEHQ6S545 545 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 DCAF4L2Q8NA75 395 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 IPMKQ8NFU5 416 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 IRF7Q92985 503 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 PGM2Q96G03 612 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 ATP6V1G3Q96LB4 118 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 PSKH2Q96QS6 385 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 C2orf49Q9BVC5 232 aaPredicted RBP17.8■□□□□ 0.44
KRT28-201ENST00000306658 SPHK2Q9NRA0 654 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 GDE1Q9NZC3 331 aa17.8■□□□□ 0.44
KRT28-201ENST00000306658 SAMD15Q9P1V8 674 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms