RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OLFM3Q96PB7 478 aa24.93■■□□□ 1.58
HOXC9-201ENST00000303450 CKAP5Q14008 2032 aa24.93■■□□□ 1.58
HOXC9-201ENST00000303450 TARSL2A2RTX5 802 aaKnown RBP24.92■■□□□ 1.58
HOXC9-201ENST00000303450 ZBTB24O43167 697 aaPredicted RBP24.92■■□□□ 1.58
HOXC9-201ENST00000303450 BNIP3LO60238 219 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 TMCC1O94876 653 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 COL9A1P20849 921 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 CCNCP24863 283 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 RFTN1Q14699 578 aaPredicted RBP24.92■■□□□ 1.58
HOXC9-201ENST00000303450 Q6ZVU0 165 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 PCDH20Q8N6Y1 951 aaKnown RBP24.92■■□□□ 1.58
HOXC9-201ENST00000303450 TSTD1Q8NFU3 115 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 PTPRN2Q92932 1015 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 TSGA13Q96PP4 275 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 LGMNQ99538 433 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 BRD8Q9H0E9 1235 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 PRSS16Q9NQE7 514 aa24.92■■□□□ 1.58
HOXC9-201ENST00000303450 CEP104O60308 925 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 SIN3BO75182 1162 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 VAV1P15498 845 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 AP1B1Q10567 949 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 CAMK2GQ13555 558 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 C9orf64Q5T6V5 341 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 TMCO4Q5TGY1 634 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 SLC13A5Q86YT5 568 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 LRRN4Q8WUT4 740 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 ISG20Q96AZ6 181 aaKnown RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 PBKQ96KB5 322 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 CCDC114Q96M63 670 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 HHIPQ96QV1 700 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 TNKS2Q9H2K2 1166 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 KMT2EQ8IZD2 1858 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 TCRBV21S2A2A0A5A6 115 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 PAPSS2O95340 614 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 RECQLP46063 649 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 OTUD4Q01804 1114 aaKnown RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 PPIDQ08752 370 aaKnown RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 KLF1Q13351 362 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 LBRQ14739 615 aaKnown RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 CCDC13Q8IYE1 715 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 TTC13Q8NBP0 860 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 ACTL9Q8TC94 416 aa24.91■■□□□ 1.58
HOXC9-201ENST00000303450 NAPGQ99747 312 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 CINPQ9BW66 212 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 FARP1Q9Y4F1 1045 aaPredicted RBP24.91■■□□□ 1.58
HOXC9-201ENST00000303450 CTAGE9A4FU28 777 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 ZNF821O75541 412 aaPredicted RBP24.9■■□□□ 1.58
HOXC9-201ENST00000303450 ALDH1A2O94788 518 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 RHOAP61586 193 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 ZNF33AQ06730 810 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 CYTH1Q15438 398 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 MARC1Q5VT66 337 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 ZC3H18Q86VM9 953 aaKnown RBP24.9■■□□□ 1.58
HOXC9-201ENST00000303450 BBS5Q8N3I7 341 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 CAMKK1Q8N5S9 505 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 TFB1MQ8WVM0 346 aaKnown RBP24.9■■□□□ 1.58
HOXC9-201ENST00000303450 OSBPL9Q96SU4 736 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 TM6SF2Q9BZW4 377 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 CD248Q9HCU0 757 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 PRMT8Q9NR22 394 aaPredicted RBP24.9■■□□□ 1.58
HOXC9-201ENST00000303450 SEPT3Q9UH03 358 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 SNX12Q9UMY4 172 aa24.9■■□□□ 1.58
HOXC9-201ENST00000303450 TCRBV7S2A1N4TA0A589 114 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 MATN3O15232 486 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 APBB3O95704 486 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 PEX11BO96011 259 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 RENBPP51606 427 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 SNRPD1P62314 119 aaKnown RBP24.89■■□□□ 1.57
HOXC9-201ENST00000303450 SLC10A7Q0GE19 358 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 ELAVL3Q14576 367 aaKnown RBP24.89■■□□□ 1.57
HOXC9-201ENST00000303450 ZNF235Q14590 738 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 NOMO1Q15155 1222 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 ADAT2Q7Z6V5 191 aaKnown RBP24.89■■□□□ 1.57
HOXC9-201ENST00000303450 OR2T3Q8NH03 318 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 HMGB4Q8WW32 186 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 FATE1Q969F0 183 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 FBRSQ9HAH7 460 aa24.89■■□□□ 1.57
HOXC9-201ENST00000303450 BCCIPQ9P287 314 aaKnown RBP eCLIP24.89■■□□□ 1.57
HOXC9-201ENST00000303450 H7C0C1 242 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 RNASEH1O60930 286 aaKnown RBP24.88■■□□□ 1.57
HOXC9-201ENST00000303450 FGGP02679 453 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 ATP5OP48047 213 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 NUBP1P53384 320 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 ETF1P62495 437 aaKnown RBP24.88■■□□□ 1.57
HOXC9-201ENST00000303450 XRCC4Q13426 336 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 HNRNPDQ14103 355 aaKnown RBP24.88■■□□□ 1.57
HOXC9-201ENST00000303450 CARD16Q5EG05 197 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 ANO7Q6IWH7 933 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 B4GALNT4Q76KP1 1039 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 STK40Q8N2I9 435 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 PGBD3Q8N328 593 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 RYBPQ8N488 228 aaPredicted RBP24.88■■□□□ 1.57
HOXC9-201ENST00000303450 OR2A12Q8NGT7 310 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 OR8D1Q8WZ84 308 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 FAM118BQ9BPY3 351 aa24.88■■□□□ 1.57
HOXC9-201ENST00000303450 HACD1B0YJ81 288 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 K7ESF4 209 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 MCF2LO15068 1137 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 NEBLO76041 1014 aa24.87■■□□□ 1.57
HOXC9-201ENST00000303450 GSRP00390 522 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms