RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CDH3P22223 829 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 DCKP27707 260 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 ADSLP30566 484 aaPredicted RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 SLC7A1P30825 629 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 PSMD8P48556 350 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 NAGLUP54802 743 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 PRKCQQ04759 706 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 GALNT2Q10471 571 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 CYP2A13Q16696 494 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 GRTP1Q5TC63 336 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 PPP4R4Q6NUP7 873 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 TTC33Q6PID6 262 aaPredicted RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM151AQ8N4L1 468 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 COLGALT1Q8NBJ5 622 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 WNK4Q96J92 1243 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 SPATA13Q96N96 652 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 ACE2Q9BYF1 805 aaPredicted RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 FAM32AQ9Y421 112 aaKnown RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 RIPK3Q9Y572 518 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 CNTNAP1P78357 1384 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 CILPO75339 1184 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 SULT1C4O75897 302 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 CCND2P30279 289 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 GJA8P48165 433 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 ANKRD26P1Q6NSI1 321 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 ZPBP2Q6X784 338 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 CDR2LQ86X02 465 aaPredicted RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 URGCPQ8TCY9 931 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 HTR3CQ8WXA8 447 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 PPWD1Q96BP3 646 aaKnown RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 HEPHQ9BQS7 1158 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 MAF1Q9H063 256 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 ADAM28Q9UKQ2 775 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 MDM4O15151 490 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 OGTO15294 1046 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 SUPT20HL2P0C7V6 817 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 HSPA1AP0DMV8 641 aaKnown RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 HSPA1BP0DMV9 641 aaKnown RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 PSMB4P28070 264 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 MAPK10P53779 464 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 TNK2Q07912 1038 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 EML3Q32P44 896 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 SUPT20HL1Q3ZLR7 823 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF667Q5HYK9 610 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 LIPMQ5VYY2 423 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 NCBP2-AS2Q69YL0 99 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 NIPAL1Q6NVV3 410 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 SLC15A4Q8N697 577 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 SNX31Q8N9S9 440 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF669Q96BR6 464 aaPredicted RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM176AQ96HP8 235 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 UNC93B1Q9H1C4 597 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 CACNA2D2Q9NY47 1150 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 HESX1Q9UBX0 185 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 TMED5Q9Y3A6 229 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 HEATR9A2RTY3 570 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 TRIM64BA6NI03 449 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 PAPSS1O43252 624 aaPredicted RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 H2AFYO75367 372 aaKnown RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 BAIAP3O94812 1187 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF182P17025 639 aaPredicted RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 MYF6P23409 242 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 SPRP35270 261 aaPredicted RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 GLRBP48167 497 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 PRKAA1Q13131 559 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 DGKDQ16760 1214 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 EEPD1Q7L9B9 569 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 CBR4Q8N4T8 237 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 ANKFN1Q8N957 763 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF420Q8TAQ5 688 aaPredicted RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 CANT1Q8WVQ1 401 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 TBCBQ99426 244 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 ADI1Q9BV57 179 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM39BQ9GZU3 492 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 POLR1BQ9H9Y6 1135 aa11.04□□□□□ -0.64
ZNF558-201ENST00000301475 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 PTBP2Q9UKA9 531 aaKnown RBP11.04□□□□□ -0.64
ZNF558-201ENST00000301475 NRP1O14786 923 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 USP12O75317 370 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 POLBP06746 335 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 PFKMP08237 780 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 SP2Q02086 613 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 GNA12Q03113 381 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 NME3Q13232 169 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 LRP8Q14114 963 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 NR1D2Q14995 579 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 BCL2A1Q16548 175 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 FAM219BQ5XKK7 198 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 EGFLAMQ63HQ2 1017 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 OLFML1Q6UWY5 402 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 ZYG11AQ6WRX3 759 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TTC30AQ86WT1 665 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM192Q8IY95 271 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 KDM1BQ8NB78 822 aa11.03□□□□□ -0.64
ZNF558-201ENST00000301475 SREK1Q8WXA9 508 aaKnown RBP11.03□□□□□ -0.64
ZNF558-201ENST00000301475 TOP1MTQ969P6 601 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms