RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 MLNP12872 115 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 AOC1P19801 751 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 MPSTP25325 297 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 NUDT2P50583 147 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 BEX3Q00994 111 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ZNF460Q14592 562 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ANKRD20A4Q4UJ75 823 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 KCNMB4Q86W47 210 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ZFP28Q8NHY6 868 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 URGCPQ8TCY9 931 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 SREK1Q8WXA9 508 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 CPNE1Q99829 537 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 OMDQ99983 421 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 MKS1Q9NXB0 559 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 USP3Q9Y6I4 520 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 F8W8V4 182 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 ALDH1A2O94788 518 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 MYL3P08590 195 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 SMIM18P0DKX4 95 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NELFEP18615 380 aaKnown RBP13.67□□□□□ -0.22
CTDP1-202ENST00000299543 CPOXP36551 454 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 AFF1P51825 1210 aaKnown RBP13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NAGLUP54802 743 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NAA20P61599 178 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 POU6F1Q14863 301 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 SV2CQ496J9 727 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 KLC3Q6P597 504 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 PDZD4Q76G19 769 aaPredicted RBP13.67□□□□□ -0.22
CTDP1-202ENST00000299543 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
CTDP1-202ENST00000299543 LENG8Q96PV6 779 aaPredicted RBP13.67□□□□□ -0.22
CTDP1-202ENST00000299543 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NMRAL1Q9HBL8 299 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NUDT5Q9UKK9 219 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 KCNH4Q9UQ05 1017 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 PIRO00625 290 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 ZBTB14O43829 449 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 GPR32O75388 356 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NMBRP28336 390 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 TBCCQ15814 346 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 MYLK3Q32MK0 819 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 PPM1LQ5SGD2 360 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 GRTP1Q5TC63 336 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 STEAP4Q687X5 459 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 CLEC20AQ6ZU45 233 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NPWQ8N729 165 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 NAT9Q9BTE0 207 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 S100A14Q9HCY8 104 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 ADAMTS6Q9UKP5 1117 aa13.67□□□□□ -0.22
CTDP1-202ENST00000299543 MYBPHLA2RUH7 354 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 ENO3P13929 434 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 RAG1P15918 1043 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 YBX3P16989 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SERPINB8P50452 374 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 PKNOX1P55347 436 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CTBP1Q13363 440 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TUBB3Q13509 450 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TMEM198Q66K66 360 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 GPRIN1Q7Z2K8 1008 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 IPMKQ8NFU5 416 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 RBBP8Q99708 897 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 RUVBL2Q9Y230 463 aaKnown RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SSX2IPQ9Y2D8 614 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TMA7Q9Y2S6 64 aaKnown RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 H3BSA7 217 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TMX2-CTNND1H3BSU7 103 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TFAP2AP05549 437 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 ZBTB17Q13105 803 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 C16orf72Q14CZ0 275 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SNX17Q15036 470 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CYTH1Q15438 398 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CCL15Q16663 113 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SPANXN3Q5MJ09 141 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 SLC7A5P1Q8MH63 180 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 LPPQ93052 612 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 NPY6RQ99463 290 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 GATA5Q9BWX5 397 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TKTL2Q9H0I9 626 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 IPPQ9Y573 584 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CDY1Q9Y6F8 540 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TMEM247A6NEH6 219 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 TRIM13O60858 407 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CLPTM1O96005 669 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 MT-CYBP00156 380 aaPredicted RBP13.66□□□□□ -0.22
CTDP1-202ENST00000299543 PRKCGP05129 697 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 CTSHP09668 335 aa13.66□□□□□ -0.22
CTDP1-202ENST00000299543 COX4I1P13073 169 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms