RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MDM4O15151 490 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 GREM1O60565 184 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 DKK1O94907 266 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 TRUB2O95900 331 aaKnown RBP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 MIPP30301 263 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 ATP5C1P36542 298 aaKnown RBP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 C19orf57Q0VDD7 668 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 TAF5Q15542 800 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 DCAF6Q58WW2 860 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 DBX2Q6ZNG2 339 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 BNIPLQ7Z465 357 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 CPNE8Q86YQ8 564 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 ADAM32Q8TC27 787 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 BHMTQ93088 406 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 UBL7Q96S82 380 aaPredicted RBP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 MKRN2Q9H000 416 aaKnown RBP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 EIF2B4Q9UI10 523 aaKnown RBP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 V9GYY5 206 aaPredicted RBP21.59■■□□□ 1.05
SMCO4-201ENST00000298966 ZNF487B1APH4 448 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 TBX18O95935 607 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 MARCKSL1P49006 195 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 SULT1E1P49888 294 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 TPMTP51580 245 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 BNC1Q01954 994 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 PDK2Q15119 407 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 BSPRYQ5W0U4 402 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 BHLHA9Q7RTU4 235 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 MARCH9Q86YJ5 346 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 MAP7D3Q8IWC1 876 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 ARFGAP1Q8N6T3 406 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 PDCD7Q8N8D1 485 aaKnown RBP21.58■■□□□ 1.05
SMCO4-201ENST00000298966 NOA1Q8NC60 698 aaKnown RBP21.58■■□□□ 1.05
SMCO4-201ENST00000298966 PRCCQ92733 491 aaPredicted RBP21.58■■□□□ 1.05
SMCO4-201ENST00000298966 SIPA1Q96FS4 1042 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 RUNDC3BQ96NL0 473 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 HOMER3Q9NSC5 361 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 CLIC5Q9NZA1 410 aa21.58■■□□□ 1.05
SMCO4-201ENST00000298966 BPTFQ12830 3046 aa21.58■■□□□ 1.04
SMCO4-201ENST00000298966 SYNCRIPO60506 623 aaKnown RBP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 FGGP02679 453 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 KRT1P04264 644 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 TUBBP07437 444 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 PYGMP11217 842 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 ABCG1P45844 678 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 YWHAGP61981 247 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 ATP11AP98196 1134 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 NAA30Q147X3 362 aaPredicted RBP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 LONRF2Q1L5Z9 754 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 C15orf59Q2T9L4 293 aaPredicted RBP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 ZFYVE27Q5T4F4 411 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 SLC13A5Q86YT5 568 aaPredicted RBP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 TMPRSS6Q8IU80 811 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 ZNF276Q8N554 614 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 UCMAQ8WVF2 138 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 CRELD1Q96HD1 420 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 CDK5RAP1Q96SZ6 601 aaKnown RBP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 OLA1Q9NTK5 396 aaKnown RBP21.57■■□□□ 1.04
SMCO4-201ENST00000298966 PLK2Q9NYY3 685 aa21.57■■□□□ 1.04
SMCO4-201ENST00000298966 A0A1B0GVT2 93 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 ACADMP11310 421 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 IL12RB1P42701 662 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 PGFP49763 221 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 ZNF135P52742 658 aaPredicted RBP21.56■■□□□ 1.04
SMCO4-201ENST00000298966 HDAC4P56524 1084 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 C2orf54Q08AI8 447 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 CAMK2BQ13554 666 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 E2F5Q15329 346 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 CDO1Q16878 200 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 GLE1Q53GS7 698 aaKnown RBP21.56■■□□□ 1.04
SMCO4-201ENST00000298966 SND1Q7KZF4 910 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMCO4-201ENST00000298966 CCDC50Q8IVM0 306 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 ANKRD7Q92527 254 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 TSC1Q92574 1164 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 NTAN1Q96AB6 310 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 SMARCAL1Q9NZC9 954 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 THAP10Q9P2Z0 257 aaPredicted RBP21.56■■□□□ 1.04
SMCO4-201ENST00000298966 FBXO10Q9UK96 956 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 SLC27A6Q9Y2P4 619 aa21.56■■□□□ 1.04
SMCO4-201ENST00000298966 FAM149AA5PLN7 773 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 M0QYT0 321 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 KRIT1O00522 736 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 TNFSF14O43557 240 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 FYNP06241 537 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 RALAP11233 206 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 DEUP1Q05D60 604 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 MTA1Q13330 715 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 ZNF211Q13398 564 aaPredicted RBP21.55■■□□□ 1.04
SMCO4-201ENST00000298966 CCDC157Q569K6 752 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 TFDP3Q5H9I0 405 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 MSANTD2Q6P1R3 559 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 TADA2BQ86TJ2 420 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 SNX19Q92543 992 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 DCBLD2Q96PD2 775 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 OSBPL8Q9BZF1 889 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 PCED1AQ9H1Q7 454 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.55■■□□□ 1.04
SMCO4-201ENST00000298966 BTBD3Q9Y2F9 522 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 CKAP5Q14008 2032 aa21.55■■□□□ 1.04
SMCO4-201ENST00000298966 TMEM131Q92545 1883 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms