RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZBTB6Q15916 424 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 PSMD5Q16401 504 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 APOBEC3FQ8IUX4 373 aaKnown RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 CCDC117Q8IWD4 279 aaPredicted RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 CNTN4Q8IWV2 1026 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 TMEM130Q8N3G9 435 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 KDM1BQ8NB78 822 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 KLHL23Q8NBE8 558 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 NTAN1Q96AB6 310 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 NPY6RQ99463 290 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 EFHD1Q9BUP0 239 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 GBA3Q9H227 469 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 ERAP1Q9NZ08 941 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 PCDHGB4Q9UN71 923 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 SCAF8Q9UPN6 1271 aaKnown RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 MYRFQ9Y2G1 1151 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 RNF11Q9Y3C5 154 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 PCDHGB5Q9Y5G0 923 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 COPG1Q9Y678 874 aaKnown RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 C9IYK1 514 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 TRIM24O15164 1050 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 EGFRP00533 1210 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 KPNA2P52292 529 aaKnown RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 PSME3P61289 254 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 SCAPQ12770 1279 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 KCTD21Q4G0X4 260 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 ZC3HC1Q86WB0 502 aaKnown RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 PYROXD2Q8N2H3 581 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 TRAPPC12Q8WVT3 735 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 ANKRD60Q9BZ19 345 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 MAGEB5Q9BZ81 275 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 TASP1Q9H6P5 420 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 KLHL8Q9P2G9 620 aaPredicted RBP19.46■□□□□ 0.71
TRA2A-201ENST00000297071 SLC8A2Q9UPR5 921 aa19.46■□□□□ 0.71
TRA2A-201ENST00000297071 DICER1Q9UPY3 1922 aaKnown RBP19.45■□□□□ 0.7
TRA2A-201ENST00000297071 MCM3APO60318 1980 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 PAPPA2Q9BXP8 1791 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 A0A087WZ62 844 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 XPO1O14980 1071 aaKnown RBP19.45■□□□□ 0.7
TRA2A-201ENST00000297071 PFDN1O60925 122 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 SULT1E1P49888 294 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 PKNOX1P55347 436 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 NUP107P57740 925 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 ZNF33AQ06730 810 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 BSPRYQ5W0U4 402 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 LRRC8EQ6NSJ5 796 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 CES3Q6UWW8 571 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 PIWIL4Q7Z3Z4 852 aaKnown RBP19.45■□□□□ 0.7
TRA2A-201ENST00000297071 ANKFN1Q8N957 763 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 GOLM1Q8NBJ4 401 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 CLEC4CQ8WTT0 213 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 JDP2Q8WYK2 163 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 EME1Q96AY2 570 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 DNAJC1Q96KC8 554 aaKnown RBP19.45■□□□□ 0.7
TRA2A-201ENST00000297071 SPATA33Q96N06 139 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 TSPAN18Q96SJ8 248 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 AGAP2Q99490 1192 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 CCT7Q99832 543 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 FDXACB1Q9BRP7 624 aaPredicted RBP19.45■□□□□ 0.7
TRA2A-201ENST00000297071 KIFC1Q9BW19 673 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 NUF2Q9BZD4 464 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 SNX25Q9H3E2 840 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 C8orf4Q9NR00 106 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 PCDHGA7Q9Y5G6 932 aa19.45■□□□□ 0.7
TRA2A-201ENST00000297071 ARHGEF37A1IGU5 675 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 SDHDO14521 159 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 SQLEQ14534 574 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 OTUD1Q5VV17 481 aaPredicted RBP19.44■□□□□ 0.7
TRA2A-201ENST00000297071 DEFB106AQ8N104 65 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 AFAP1L2Q8N4X5 818 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 TRIML2Q8N7C3 387 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 CCNYQ8ND76 341 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 HDAC11Q96DB2 347 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 STAP1Q9ULZ2 295 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 PPP2R3BQ9Y5P8 575 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 SHROOM3Q8TF72 1996 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 TRIM64A6NGJ6 449 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 H3BSA7 217 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 EEF2KO00418 725 aaKnown RBP19.44■□□□□ 0.7
TRA2A-201ENST00000297071 NEMP1O14524 444 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 CFLARO15519 480 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 TSPAN1O60635 241 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 PCSK6P29122 969 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 ATP4BP51164 291 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 TKTL1P51854 596 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 GALNT1Q10472 559 aaPredicted RBP19.44■□□□□ 0.7
TRA2A-201ENST00000297071 SEMA3BQ13214 749 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 LRP8Q14114 963 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 GK3PQ14409 553 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 LPIN1Q14693 890 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 GRM3Q14832 879 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 IL23RQ5VWK5 629 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 FAM45BPQ6NSW5 357 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 LIMS2Q7Z4I7 341 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 LINC00523Q86TU6 105 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 BBS5Q8N3I7 341 aa19.44■□□□□ 0.7
TRA2A-201ENST00000297071 BEST2Q8NFU1 509 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms