RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SLC10A7Q0GE19 358 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 RIPK1Q13546 671 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 GALNT3Q14435 633 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ALFQ53S48 1182 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 CYS1Q717R9 158 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 LGI2Q8N0V4 545 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NUP93Q8N1F7 819 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 AUTS2Q8WXX7 1259 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 DEFB118Q96PH6 123 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 MLPHQ9BV36 600 aaPredicted RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 CCSER2Q9H7U1 834 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 PRDM16Q9HAZ2 1276 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ARHGEF38Q9NXL2 777 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 PLK2Q9NYY3 685 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 KCTD3Q9Y597 815 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 HTTP42858 3142 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NCF1BA6NI72 391 aaPredicted RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NCF1CA8MVU1 366 aaPredicted RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 DCLK1O15075 740 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 AP2A1O95782 977 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NCF1P14598 390 aaPredicted RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 EPHA3P29320 983 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 OR1D2P34982 312 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 SKIV2L2P42285 1042 aaKnown RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ALDH7A1P49419 539 aaKnown RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 KCNQ1P51787 676 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 WNT3AP56704 352 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NSUN2Q08J23 767 aaKnown RBP eCLIP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 RCN1Q15293 331 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 DEFB115Q30KQ5 88 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 FAM219BQ5XKK7 198 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 C4orf22Q6V702 233 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 RINLQ6ZS11 566 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ASRGL1Q7L266 308 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 TEX9Q8N6V9 391 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 FBXO27Q8NI29 283 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ZSCAN18Q8TBC5 510 aaPredicted RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 SLC26A7Q8TE54 656 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ARNTL2Q8WYA1 636 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 KCTD13Q8WZ19 329 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 MTBPQ96DY7 904 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 ERLEC1Q96DZ1 483 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 CAPNS2Q96L46 248 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 TEKT5Q96M29 485 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 TBL1YQ9BQ87 522 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NMRAL1Q9HBL8 299 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
PRDM9-201ENST00000296682 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 DCDC2Q9UHG0 476 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 NUMBLQ9Y6R0 609 aa9.45□□□□□ -0.9
PRDM9-201ENST00000296682 HMX2A2RU54 273 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 FAM159BA6NKW6 160 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 CHRNGP07510 517 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 SLC10A3P09131 477 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 HOXD10P28358 340 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 OR6K2Q8NGY2 324 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 HMCESQ96FZ2 354 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 NKX1-2Q9UD57 310 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 PLA2G4CQ9UP65 541 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 ATP6AP2A0A1C7CYW4 349 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 AURKAO14965 403 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 MGRN1O60291 552 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 ATP6AP2O75787 350 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 INHAP05111 366 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 HLA-DQB2P05538 268 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 HAPLN1P10915 354 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 PRKCHP24723 683 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 PTPN4P29074 926 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 RAB27AP51159 221 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 CSE1LP55060 971 aaKnown RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 SEMG2Q02383 582 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 DPYSQ14117 519 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 POLD3Q15054 466 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 PRKD1Q15139 912 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 TCHHL1Q5QJ38 904 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 LINGO4Q6UY18 593 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 RTN4RL1Q86UN2 441 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 DENND1CQ8IV53 801 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 KLHDC8BQ8IXV7 354 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 PIWIL2Q8TC59 973 aaKnown RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 DENND2DQ9H6A0 471 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 PLAC1Q9HBJ0 212 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 THAP1Q9NVV9 213 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 OSER1Q9NX31 292 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 MKS1Q9NXB0 559 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 UTP6Q9NYH9 597 aaKnown RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 UXTQ9UBK9 157 aaPredicted RBP9.44□□□□□ -0.9
PRDM9-201ENST00000296682 HS3ST4Q9Y661 456 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 CASP8AP2Q9UKL3 1982 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 GON4LQ3T8J9 2241 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 IRAK2O43187 625 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 TLR5O60602 858 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 GPC4O75487 556 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 KRT36O76013 467 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 NEK3P51956 506 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 NXNL1Q96CM4 212 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 SLC2A13Q96QE2 648 aa9.44□□□□□ -0.9
PRDM9-201ENST00000296682 SMIM14Q96QK8 99 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms