RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CPSF3Q9UKF6 684 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 GPR25O00155 361 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ZNF182P17025 639 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PFKPQ01813 784 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 SP2Q02086 613 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PRKCQQ04759 706 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PMS2P3Q13401 168 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 BTG3Q14201 252 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ZNF460Q14592 562 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ZNF829Q3KNS6 432 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 TBCELQ5QJ74 424 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 HMBOX1Q6NT76 420 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PMF1Q6P1K2 205 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ZPBP2Q6X784 338 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 FAM131BQ86XD5 332 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CNTD1Q8N815 330 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 TRPC4APQ8TEL6 797 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CSPG4P5Q96PW8 444 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CYP4F12Q9HCS2 524 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 SMOXQ9NWM0 555 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 SIX4Q9UIU6 781 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 MID2Q9UJV3 735 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 VPS28Q9UK41 221 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CNOT11Q9UKZ1 510 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PRORSD1PA6NEY8 169 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 H3BMQ9 156 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CILPO75339 1184 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 MPOP05164 745 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CYP3A5P20815 502 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CLCN2P51788 898 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 KPNA1P52294 538 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 SLC7A2P52569 658 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CD300CQ08708 224 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 FASTKQ14296 549 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 NANOGP8Q6NSW7 305 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 DHFR2Q86XF0 187 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 P2RY11Q96G91 374 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 FBXL20Q96IG2 436 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 VPS39Q96JC1 886 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 COG8Q96MW5 612 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 KCTD15Q96SI1 283 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CORO1BQ9BR76 489 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 DRC3Q9H069 523 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 SOX17Q9H6I2 414 aaPredicted RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 TMEM134Q9H6X4 195 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 RPF2Q9H7B2 306 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 GID8Q9NWU2 228 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 BFARQ9NZS9 450 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PCDHGA7Q9Y5G6 932 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 HTR3EA5X5Y0 456 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 MRASO14807 208 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 CLOCKO15516 846 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 MFSD11O43934 449 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 MSCO60682 206 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 TADA2AO75478 443 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 SRP72O76094 671 aaKnown RBP10.41□□□□□ -0.74
LMX1A-201ENST00000294816 LCP1P13796 627 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 NAB1Q13506 487 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 TRIM16LQ309B1 348 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 SPANXN3Q5MJ09 141 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 FAM219BQ5XKK7 198 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 GALNT18Q6P9A2 607 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 DHRS4L2Q6PKH6 230 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 EEPD1Q7L9B9 569 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 LYSMD3Q7Z3D4 306 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 SPNS2Q8IVW8 549 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 CCDC185Q8N715 623 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 ARL10Q8N8L6 244 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 TBC1D15Q8TC07 691 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 CLEC4CQ8WTT0 213 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 SLC35B4Q969S0 331 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 SLCO4A1Q96BD0 722 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 TCF12Q99081 682 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 MTG1Q9BT17 334 aaPredicted RBP10.41□□□□□ -0.74
LMX1A-201ENST00000294816 NAT9Q9BTE0 207 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 EGFL7Q9UHF1 273 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 H2AFYO75367 372 aaKnown RBP10.41□□□□□ -0.74
LMX1A-201ENST00000294816 E2F6O75461 281 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 MLNP12872 115 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 SLC7A1P30825 629 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 STX5Q13190 355 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 GRM3Q14832 879 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 RAB39AQ14964 217 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 PLCL1Q15111 1095 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 CYP2A13Q16696 494 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 CERCAMQ5T4B2 595 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 ATF7IP2Q5U623 682 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 REP15Q6BDI9 236 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 RPS27LQ71UM5 84 aaKnown RBP10.41□□□□□ -0.74
LMX1A-201ENST00000294816 ACOT1Q86TX2 421 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 HPDLQ96IR7 371 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 ADI1Q9BV57 179 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 ANKRD60Q9BZ19 345 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 LRRC40Q9H9A6 602 aa10.41□□□□□ -0.74
LMX1A-201ENST00000294816 NRBP2Q9NSY0 501 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms