RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 RAD9AQ99638 391 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 SLC13A1Q9BZW2 595 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 SLCO1B3Q9NPD5 702 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MPP6Q9NZW5 540 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 PRKAG3Q9UGI9 489 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CAPN7Q9Y6W3 813 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MYLKQ15746 1914 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 C5orf67F2Z3F1 127 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 GFRA2O00451 464 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ATP9BO43861 1147 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 USP1O94782 785 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 DHRS4L1P0CG22 281 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CCNFP41002 786 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ETV4P43268 484 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 OLIG2Q13516 323 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 RNF43Q68DV7 783 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CGB2Q6NT52 195 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 PACS1Q6VY07 963 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ARHGAP36Q6ZRI8 547 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 RTL10Q7L3V2 364 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 TMEM135Q86UB9 458 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 UNC5BQ8IZJ1 945 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 NDUFAF2Q8N183 169 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 TEX26Q8N6G2 289 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ACMSDQ8TDX5 336 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ATP2A3Q93084 1043 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ZNF669Q96BR6 464 aaPredicted RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 ZFRQ96KR1 1074 aaKnown RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 UBP1Q9NZI7 540 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 TRPM5Q9NZQ8 1165 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 PLLPQ9Y342 182 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 FAM237BA0A1B0GVD1 139 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 H3BNC9 293 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 GSTA1P08263 222 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CNPP09543 421 aaKnown RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 TROVE2P10155 538 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDPN-201ENST00000294489 TACR2P21452 398 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ALDH3A1P30838 453 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 PAPOLAP51003 745 aaKnown RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 GEMP55040 296 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 TWF1Q12792 350 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ALFQ53S48 1182 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ARMC3Q5W041 872 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CES3Q6UWW8 571 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 OTOP3Q7RTS5 596 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 DNAJB7Q7Z6W7 309 aaPredicted RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 TRIM42Q8IWZ5 723 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 KLHL23Q8NBE8 558 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 AUTS2Q8WXX7 1259 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 TADA1Q96BN2 335 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 MYEOVQ96EZ4 313 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CPNE1Q99829 537 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 APOL2Q9BQE5 337 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 C12orf65Q9H3J6 166 aaKnown RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 GLOD4Q9HC38 313 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 HAUS2Q9NVX0 235 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 RBM22Q9NW64 420 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDPN-201ENST00000294489 IPO11Q9UI26 975 aaKnown RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 ACSL4O60488 711 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 GREM1O60565 184 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CNTN5O94779 1100 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ERVK-10P10266 1014 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 SLC6A4P31645 630 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CRHR1P34998 444 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 GP5P40197 560 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 SCTRP47872 440 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 SERPINB4P48594 390 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 KCNQ1P51787 676 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 EPHB3P54753 998 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 PDE1BQ01064 536 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 VEPH1Q14D04 833 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ANKRD20A4Q4UJ75 823 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CERCAMQ5T4B2 595 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 GRTP1Q5TC63 336 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ITIH5Q86UX2 942 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 TMC8Q8IU68 726 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 CCDC117Q8IWD4 279 aaPredicted RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 FAM217AQ8IXS0 508 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDPN-201ENST00000294489 KLHL5Q96PQ7 755 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 ZNF334Q9HCZ1 680 aaPredicted RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 ABCF3Q9NUQ8 709 aa9.3□□□□□ -0.92
PDPN-201ENST00000294489 MAGED2Q9UNF1 606 aaPredicted RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 MYO18AQ92614 2054 aaKnown RBP9.3□□□□□ -0.92
PDPN-201ENST00000294489 HMX2A2RU54 273 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 VGLL3A8MV65 326 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 TGM5O43548 720 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 STC2O76061 302 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 PFKLP17858 780 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 BMPR1AP36894 532 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 YBEYP58557 167 aaPredicted RBP9.29□□□□□ -0.92
PDPN-201ENST00000294489 SETDB1Q15047 1291 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 PARP15Q460N3 678 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 RAP1GAP2Q684P5 730 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 NSMCE1Q8WV22 266 aa9.29□□□□□ -0.92
PDPN-201ENST00000294489 ZNF512Q96ME7 567 aaPredicted RBP9.29□□□□□ -0.92
PDPN-201ENST00000294489 FCRL3Q96P31 734 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms