RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 F8VP50 259 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ENTPD5O75356 428 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CETPP11597 493 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ALADP13716 330 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 LHX1P48742 406 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CDKAL1Q5VV42 579 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ALKBH2Q6NS38 261 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 NEK5Q6P3R8 708 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 EIF3MQ7L2H7 374 aaKnown RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 RAMP2O60895 175 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ADAM17P78536 824 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CRY1Q16526 586 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF484Q5JVG2 852 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 SLC2A14Q8TDB8 520 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CCDC28BQ9BUN5 200 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 PIGUQ9H490 435 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 COX4I1P13073 169 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 TAB1Q15750 504 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 FNDC3BQ53EP0 1204 aaKnown RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 IRGCQ6NXR0 463 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 MTG1Q9BT17 334 aaPredicted RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF518BQ9C0D4 1074 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 GANQ9H2C0 597 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CRISPLD1Q9H336 500 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 OR56A5P0C7T3 313 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 WARSP23381 471 aaKnown RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 SREBF1P36956 1147 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 PTPN5P54829 565 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 TGM3Q08188 693 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 NET1Q7Z628 596 aaPredicted RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CLYBLQ8N0X4 340 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 GPR156Q8NFN8 814 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 S100A13Q99584 98 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 SYT15Q9BQS2 421 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 KBTBD4Q9NVX7 518 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 TRNAU1APQ9NX07 287 aaKnown RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ANKRD63C9JTQ0 380 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CAP2P40123 477 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CBFBQ13951 182 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 HYIQ5T013 277 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 PMF1Q6P1K2 205 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 MZT2AQ6P582 158 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 KCNT2Q6UVM3 1135 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ARMC8Q8IUR7 673 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 OR7A2PQ8NGA2 310 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 FAR1Q8WVX9 515 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 PMM1Q92871 262 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 B3GALT6Q96L58 329 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 ARL15Q9NXU5 204 aa16.32■□□□□ 0.2
SSRP1-202ENST00000293880 CD86P42081 329 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FBXO47Q5MNV8 452 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 TAS2R13Q9NYV9 303 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 OPTCQ9UBM4 332 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 GMPPBQ9Y5P6 360 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 F9P00740 461 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 CDH3P22223 829 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 PDHA2P29803 388 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 MIPP30301 263 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 SPIBQ01892 262 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 C9orf131Q5VYM1 1079 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF554Q86TJ5 538 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 OFCC1Q8IZS5 231 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FBXO10Q9UK96 956 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 A0A0B4J269 797 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 E5RJQ4 531 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 SEC24AO95486 1093 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 MCL1Q07820 350 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 NFIAQ12857 509 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 PGM5Q15124 567 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 CCDC185Q8N715 623 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF606Q8WXB4 792 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 SLC47A1Q96FL8 570 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 ELL3Q9HB65 397 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 MAGEB16A2A368 324 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.29e-13■■■■■ 33.9
SSRP1-202ENST00000293880 NOS1APO75052 506 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 URODP06132 367 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FOLH1Q04609 750 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 TROAPQ12815 778 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FRG1Q14331 258 aaKnown RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 ARHGAP36Q6ZRI8 547 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 GALNT5Q7Z7M9 940 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 VPS35Q96QK1 796 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 IGFLR1Q9H665 355 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 TMPRSS4Q9NRS4 437 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 ABCA6Q8N139 1617 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FADS2O95864 444 aaKnown RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 GRIA4P48058 902 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 FCGRTP55899 365 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 SPIDRQ14159 915 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 HLA-DQA1Q5Y7H0 255 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms