RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 USP12O75317 370 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 POLR2EP19388 210 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 TYMPP19971 482 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 MARCKSL1P49006 195 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 RAB10P61026 200 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PTP4A2Q12974 167 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 CRY1Q16526 586 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 NOMO2Q5JPE7 1267 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 POTEHQ6S545 545 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 FNIP1Q8TF40 1166 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 MYLPFQ96A32 169 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 UNKQ9C0B0 810 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 CCDC167Q9P0B6 97 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 CATP04040 527 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PROCP04070 461 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 DRD4P21917 467 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 GPR15P49685 360 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 TMED10P49755 219 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 SLC16A1P53985 500 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 INSCQ1MX18 579 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 POU5F2Q8N7G0 328 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 SEPHS2Q99611 448 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 NIFKQ9BYG3 293 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PDGFDQ9GZP0 370 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 RNPEPL1Q9HAU8 725 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PDZK1P1A8MUH7 402 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 RECQL5O94762 991 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PCDH8O95206 1070 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 KCNH1O95259 989 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 EIF2S1P05198 315 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ITGB6P18564 788 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 CHKAP35790 457 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 CD86P42081 329 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 TAS2R40P59535 323 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 BOP1Q14137 746 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ACOX1Q15067 660 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ATP13A4Q4VNC1 1196 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 TSHZ1Q6ZSZ6 1077 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 DHRSXQ8N5I4 330 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 RP9Q8TA86 221 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ITFG1Q8TB96 612 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PALMDQ9NP74 551 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 SMPD4Q9NXE4 827 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 DDX3YO15523 660 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 PQBP1O60828 265 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 MT-CO1P00395 513 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ATP6V0D1P61421 351 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 UBE3AQ05086 875 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 C16orf46Q6P387 395 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 IL27RAQ6UWB1 636 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 SLC39A8Q9C0K1 460 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 STMN3Q9NZ72 180 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 LIMD1Q9UGP4 676 aa12.95□□□□□ -0.34
PTCD1-201ENST00000292478 MTF2Q9Y483 593 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-201ENST00000292478 ATG7O95352 703 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 MMP8P22894 467 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 LRPAP1P30533 357 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 HTR7P34969 479 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 POLD2P49005 469 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ARMCX4Q5H9R4 360 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 LCLAT1Q6UWP7 414 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 NECAB2Q7Z6G3 386 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 CACNA2D2Q9NY47 1150 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 KLHL3Q9UH77 587 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 FAM20BO75063 409 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 SERPINA6P08185 405 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 POU1F1P28069 291 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 GRK4P32298 578 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 IFNGR2P38484 337 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 LPCAT2Q7L5N7 544 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 SLC41A1Q8IVJ1 513 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 SPPL2AQ8TCT8 520 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 KLRG1Q96E93 195 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 OSGEPL1Q9H4B0 414 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 TRPC4Q9UBN4 977 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 ANAPC2Q9UJX6 822 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 CRYL1Q9Y2S2 319 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 MYO5BQ9ULV0 1848 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 UBR1Q8IWV7 1749 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 A0A087WXM4 84 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.94□□□□□ -0.34
PTCD1-201ENST00000292478 PRR23AA6NEV1 266 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
PTCD1-201ENST00000292478 PDE5AO76074 875 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms