RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 SPNS2Q8IVW8 549 aa20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 SPATA6LQ8N4H0 392 aa20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 ATPAF2Q8N5M1 289 aa20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 CMTM5Q96DZ9 223 aa20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 DMAP1Q9NPF5 467 aaPredicted RBP20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 CDH22Q9UJ99 828 aa20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 TLK1Q9UKI8 766 aa20.27■□□□□ 0.83
SCUBE1-201ENST00000290460 FNDC1Q4ZHG4 1894 aaPredicted RBP20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 TMEM114B3SHH9 223 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 KIF1CO43896 1103 aaKnown RBP20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 MGEA5O60502 916 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 NEBLO76041 1014 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 VAPBO95292 243 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 PGK1P00558 417 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 ITGB1P05556 798 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 SLC35E2BP0CK96 405 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 TCHHL1Q5QJ38 904 aaPredicted RBP20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 IZUMO2Q6UXV1 221 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 HIPK4Q8NE63 616 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 IRGQQ8WZA9 623 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 SCYL1Q96KG9 808 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 TBL1YQ9BQ87 522 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 RHOJQ9H4E5 214 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 SLC2A6Q9UGQ3 507 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 INPP5FQ9Y2H2 1132 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 GIT1Q9Y2X7 761 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 Q9Y3F1 56 aa20.26■□□□□ 0.83
SCUBE1-201ENST00000290460 PAGE1O75459 146 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 COX4I1P13073 169 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 RPL9P32969 192 aaKnown RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 SERPINB5P36952 375 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 GRIA4P48058 902 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 CSRP3P50461 194 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 ESRP1Q6NXG1 681 aaKnown RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 IRGCQ6NXR0 463 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 LINC00523Q86TU6 105 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 HPS6Q86YV9 775 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 MFSD6LQ8IWD5 586 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 TRPV1Q8NER1 839 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 ACBD6Q9BR61 282 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 FICDQ9BVA6 458 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 GPAMQ9HCL2 828 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 DLGAP2Q9P1A6 1054 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 G3BP2Q9UN86 482 aaKnown RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 COL4A4P53420 1690 aaPredicted RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 CD52P31358 61 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 PSEN1P49768 467 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 KLF10Q13118 480 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 ZRSR2Q15696 482 aaKnown RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 CD300LGQ6UXG3 332 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 CENPLQ8N0S6 344 aaPredicted RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 ACTRT2Q8TDY3 377 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 SREK1Q8WXA9 508 aaKnown RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 SLC39A8Q9C0K1 460 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 OSBPL2Q9H1P3 480 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 RUVBL2Q9Y230 463 aaKnown RBP20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 MYO16Q9Y6X6 1858 aa20.25■□□□□ 0.83
SCUBE1-201ENST00000290460 IRAK2O43187 625 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CCNT2O60583 730 aaKnown RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 MAFKO60675 156 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PMPCBO75439 489 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 IGLV3-25P01717 112 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 ARNTP27540 789 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 EPHA3P29320 983 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 RGS2P41220 211 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 ZNF135P52742 658 aaPredicted RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 NAGLUP54802 743 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 COG7P83436 770 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CCNIQ14094 377 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 TMCO4Q5TGY1 634 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 DENND5AQ6IQ26 1287 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PKN3Q6P5Z2 889 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PGM2L1Q6PCE3 622 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 ZYG11AQ6WRX3 759 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 RNF111Q6ZNA4 994 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CEP97Q8IW35 865 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 SLC26A7Q8TE54 656 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 TSGA13Q96PP4 275 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 LENG8Q96PV6 779 aaPredicted RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PKMYT1Q99640 499 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 ILKAPQ9H0C8 392 aaPredicted RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 S100A14Q9HCY8 104 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CHST12Q9NRB3 414 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 ARHGEF38Q9NXL2 777 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PACSIN3Q9UKS6 424 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 MIA3Q5JRA6 1907 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CACNG3O60359 315 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PIGNO95427 931 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 MOCS2O96007 188 aaPredicted RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 AKR1A1P14550 325 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CCNCP24863 283 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 LRRC36Q1X8D7 754 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 ARL13AQ5H913 290 aaPredicted RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 PCID2Q5JVF3 399 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 METTL23Q86XA0 190 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 FSTL5Q8N475 847 aaPredicted RBP20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 CASP10Q92851 521 aa20.24■□□□□ 0.83
SCUBE1-201ENST00000290460 GLOD4Q9HC38 313 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms