RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 H2AFVQ71UI9 128 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 POLNQ7Z5Q5 900 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 CNGA4Q8IV77 575 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 TP53INP2Q8IXH6 220 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 TMEFF1Q8IYR6 380 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 STK40Q8N2I9 435 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 AADATQ8N5Z0 425 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 SLC35G2Q8TBE7 412 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 TEKT4Q8WW24 435 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 ISG20Q96AZ6 181 aaKnown RBP9.36□□□□□ -0.91
HMGN1-201ENST00000288344 TBC1D31Q96DN5 1066 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 ERLEC1Q96DZ1 483 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 TOE1Q96GM8 510 aaKnown RBP9.36□□□□□ -0.91
HMGN1-201ENST00000288344 NSMCE3Q96MG7 304 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 PANX2Q96RD6 677 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGN1-201ENST00000288344 NUP85Q9BW27 656 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 ARRDC1-AS1Q9H2J1 176 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 EBF2Q9HAK2 575 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 PDFQ9HBH1 243 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 OSGEPQ9NPF4 335 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 SEMA4GQ9NTN9 838 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 SPTLC3Q9NUV7 552 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 DLL3Q9NYJ7 618 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 UVRAGQ9P2Y5 699 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 PCSK1NQ9UHG2 260 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 INTUQ9ULD6 942 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 AP4E1Q9UPM8 1137 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 REXO2Q9Y3B8 237 aaKnown RBP9.36□□□□□ -0.91
HMGN1-201ENST00000288344 SLCO1B1Q9Y6L6 691 aa9.36□□□□□ -0.91
HMGN1-201ENST00000288344 RHOBTB1O94844 696 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 PROSCO94903 275 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 MOCS3O95396 460 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 EPHB2P29323 1055 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 CD6P30203 668 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 OXTRP30559 389 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 NDST2P52849 883 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 TAS2R38P59533 333 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 TAS2R40P59535 323 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 SPEM2Q0P670 501 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 SERINC3Q13530 473 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 BYSLQ13895 437 aaKnown RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 ELAVL3Q14576 367 aaKnown RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 STARD3Q14849 445 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 CST6Q15828 149 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 EFHC2Q5JST6 749 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 KCNT1Q5JUK3 1230 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 LINGO4Q6UY18 593 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 SLC36A4Q6YBV0 504 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 PRR23BQ6ZRT6 265 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 VPS36Q86VN1 386 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 GPR161Q8N6U8 529 aaKnown RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 NPWQ8N729 165 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 PRCCQ92733 491 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 C2orf49Q9BVC5 232 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 PCED1AQ9H1Q7 454 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 NEUROG2Q9H2A3 272 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 PABPC3Q9H361 631 aaKnown RBP9.35□□□□□ -0.91
HMGN1-201ENST00000288344 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 ETNK2Q9NVF9 386 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 IP6K2Q9UHH9 426 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 DNAI1Q9UI46 699 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 ANAPC7Q9UJX3 599 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 VPS28Q9UK41 221 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 SCML1Q9UN30 329 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 CYP8B1Q9UNU6 501 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 SPTBN2O15020 2390 aa9.35□□□□□ -0.91
HMGN1-201ENST00000288344 C3orf70A6NLC5 250 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 RASA4BC9J798 803 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 MYO1FO00160 1098 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CDX4O14627 284 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ALOX15BO15296 676 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 FGF10O15520 208 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 RASA4O43374 803 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 RNF8O76064 485 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 S1PR4O95977 384 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 IGHV4-34P06331 123 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CD48P09326 243 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 GOT1P17174 413 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ERCC2P18074 760 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 C5AR1P21730 350 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ITPKAP23677 461 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CDC25BP30305 580 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 SLC8A1P32418 973 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 MAN1A1P33908 653 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 MPLP40238 635 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ZNF135P52742 658 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 KRT83P78385 493 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 BNC1Q01954 994 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ZNF33AQ06730 810 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CYTH1Q15438 398 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 TAZQ16635 292 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 INO80DQ53TQ3 878 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ZNF776Q68DI1 518 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 DPY19L3Q6ZPD9 716 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms