RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZNF567Q8N184 647 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
SKA1-201ENST00000285116 RNF139Q8WU17 664 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 KBTBD7Q8WVZ9 684 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 NLRP7Q8WX94 980 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 KCTD13Q8WZ19 329 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 NTAN1Q96AB6 310 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 VPS50Q96JG6 964 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 SLC2A13Q96QE2 648 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 NPY6RQ99463 290 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 B3GNT5Q9BYG0 378 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 OSBPL6Q9BZF3 934 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 DRC3Q9H069 523 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 TDRKHQ9Y2W6 561 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 RAP2CQ9Y3L5 183 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ADCY6O43306 1168 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 TADA2AO75478 443 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ZMPSTE24O75844 475 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 MAP3K6O95382 1288 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 LGALS2P05162 132 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 PSMB4P28070 264 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 MRPS22P82650 360 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 SEMA3BQ13214 749 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 PIGGQ5H8A4 983 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 IRAK1BP1Q5VVH5 260 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 CASC4Q6P4E1 433 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ZYG11AQ6WRX3 759 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 C7orf31Q8N865 590 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 SHCBP1Q8NEM2 672 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 BEST2Q8NFU1 509 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 FCRL3Q96P31 734 aaPredicted RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 LGMNQ99538 433 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 NUF2Q9BZD4 464 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 MROH8Q9H579 483 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 COPS7BQ9H9Q2 264 aaPredicted RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 ASB14A6NK59 587 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 BOLA2-SMG1P6H3BVE0 249 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 TXNP10599 105 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 PDCD4Q53EL6 469 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 PPTC7Q8NI37 304 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 RIN3Q8TB24 985 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 SLC35B4Q969S0 331 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 VAT1Q99536 393 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ILKAPQ9H0C8 392 aaPredicted RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 TCF7L2Q9NQB0 619 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ADARB2Q9NS39 739 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 SLC17A6Q9P2U8 582 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ITGB1BP2Q9UKP3 347 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 TRHDEQ9UKU6 1024 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 SNX9Q9Y5X1 595 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 TANC1Q9C0D5 1861 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PRSS51A0A1B0GVH4 220 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PIRO00625 290 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 HDAC3O15379 428 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 CABYRO75952 493 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 HSPA4LO95757 839 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 NOS2P35228 1153 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 MLH1P40692 756 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PNPLA4P41247 253 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 SESN2P58004 480 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 CDC42EP1Q00587 391 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 ZNF33AQ06730 810 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 IFRD2Q12894 506 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 ZNF423Q2M1K9 1284 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PPM1JQ5JR12 505 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 GJC2Q5T442 439 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 VWA5B1Q5TIE3 1220 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 C9orf57Q5W0N0 161 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 NAPRTQ6XQN6 538 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 CCDC117Q8IWD4 279 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 CHERPQ8IWX8 916 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 PGAM4Q8N0Y7 254 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 GALNT4Q8N4A0 578 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 ZNF781Q8N8C0 355 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 KYQ8NBH2 561 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 CLEC4CQ8WTT0 213 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PDCD6IPQ8WUM4 868 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 PGBD4Q96DM1 585 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 GPR22Q99680 433 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 C1QTNF1Q9BXJ1 281 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 FAM49BQ9NUQ9 324 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 MFHAS1Q9Y4C4 1052 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 PLXNB2O15031 1838 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 C9IYK1 514 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 CXCL11O14625 94 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 H6PDO95479 791 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 HSPA1AP0DMV8 641 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 HSPA1BP0DMV9 641 aaKnown RBP10.53□□□□□ -0.72
SKA1-201ENST00000285116 ERVK-10P10266 1014 aa10.53□□□□□ -0.72
SKA1-201ENST00000285116 CYP2B6P20813 491 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms