RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ARL10Q8N8L6 244 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 CLEC4CQ8WTT0 213 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 LRTOMTQ8WZ04 291 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.561e-6■■■□□ 17.2
SCLT1-201ENST00000281142 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 GPR20Q99678 358 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 SLC29A1Q99808 456 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 UNKQ9C0B0 810 aaKnown RBP11.54□□□□□ -0.56
SCLT1-201ENST00000281142 TBCCD1Q9NVR7 557 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 TSPAN16Q9UKR8 245 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 CDY2AQ9Y6F7 541 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 CDY1Q9Y6F8 540 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 RGSL1A5PLK6 1076 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 GOLGA8TH3BQL2 631 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 TK2O00142 265 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 COL6A2P12110 1019 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 IDO1P14902 403 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 MX2P20592 715 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 ITPRIPL1Q6GPH6 555 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 PMF1Q6P1K2 205 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 POTEHQ6S545 545 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 COLGALT1Q8NBJ5 622 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 PDCD6IPQ8WUM4 868 aaKnown RBP11.54□□□□□ -0.56
SCLT1-201ENST00000281142 EMID1Q96A84 441 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-201ENST00000281142 EME1Q96AY2 570 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 DCUN1D5Q9BTE7 237 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 TUT1Q9H6E5 874 aaKnown RBP11.54□□□□□ -0.56
SCLT1-201ENST00000281142 ANLNQ9NQW6 1124 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 SEPT10Q9P0V9 454 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
SCLT1-201ENST00000281142 EBF1Q9UH73 591 aa11.54□□□□□ -0.56
SCLT1-201ENST00000281142 PRPF19Q9UMS4 504 aaKnown RBP11.54□□□□□ -0.56
SCLT1-201ENST00000281142 CCDC78A2IDD5 438 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TMEM233B4DJY2 109 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 ACOT8O14734 319 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 SEPT4O43236 478 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 GABBR2O75899 941 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 HDCP19113 662 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 SAT1P21673 171 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 NUMBP49757 651 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 PSMD7P51665 324 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 CCR3P51677 355 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 PDK2Q15119 407 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-201ENST00000281142 HEATR6Q6AI08 1181 aaKnown RBP11.53□□□□□ -0.56
SCLT1-201ENST00000281142 C16orf89Q6UX73 402 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 ZPBP2Q6X784 338 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TLK2Q86UE8 772 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 ZBTB46Q86UZ6 589 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TRIM50Q86XT4 487 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 BBS5Q8N3I7 341 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 OR6J1Q8NGC5 347 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 AFG1LQ8WV93 481 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 CDKL2Q92772 493 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 KCNN1Q92952 543 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 SERPINI1Q99574 410 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TMPRSS4Q9NRS4 437 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 DTLQ9NZJ0 730 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 DYNC1LI2O43237 492 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-201ENST00000281142 PAPSS1O43252 624 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-201ENST00000281142 ME2P23368 584 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 PSMB4P28070 264 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 GLRBP48167 497 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 NDST1P52848 882 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 LAMC2Q13753 1193 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 Q6ZNX1 250 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 DDI1Q8WTU0 396 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 PPP1R16BQ96T49 567 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 TXNDC16Q9P2K2 825 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 ZDHHC2Q9UIJ5 367 aa11.53□□□□□ -0.56
SCLT1-201ENST00000281142 FAF1Q9UNN5 650 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-201ENST00000281142 A0A096LPK6 155 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 GRID2O43424 1007 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 VAPBO95292 243 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 RALGDSQ12967 914 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 C16orf72Q14CZ0 275 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 BOLA3Q53S33 107 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 MTX3Q5HYI7 312 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 FSTL4Q6MZW2 842 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 TMEM53Q6P2H8 277 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 BORAQ6PGQ7 559 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.56
SCLT1-201ENST00000281142 STRA8Q7Z7C7 330 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 CCDC185Q8N715 623 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 PPTC7Q8NI37 304 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 KCTD15Q96SI1 283 aaPredicted RBP11.52□□□□□ -0.56
SCLT1-201ENST00000281142 FAM96AQ9H5X1 160 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 C20orf96Q9NUD7 363 aaPredicted RBP11.52□□□□□ -0.56
SCLT1-201ENST00000281142 ADA2Q9NZK5 511 aa11.52□□□□□ -0.56
SCLT1-201ENST00000281142 IGKV6D-21A0A0A0MT36 114 aa11.52□□□□□ -0.57
SCLT1-201ENST00000281142 ARHGEF37A1IGU5 675 aa11.52□□□□□ -0.57
SCLT1-201ENST00000281142 MATN2O00339 956 aa11.52□□□□□ -0.57
SCLT1-201ENST00000281142 BCAS2O75934 225 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms