RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NUMBLQ9Y6R0 609 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 C5orf42Q9H799 3197 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 ERI2A8K979 691 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 H7C4K7 107 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 HOXA2O43364 376 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 USP1O94782 785 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 NCALDP61601 193 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 ELAVL2Q12926 359 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 LRRC26Q2I0M4 334 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 FASTKD1Q53R41 847 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TEDDM1Q5T9Z0 273 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 MARC1Q5VT66 337 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 PLD6Q8N2A8 252 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 PRR11Q96HE9 360 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 C20orf27Q9GZN8 174 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TMEM39AQ9NV64 488 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TMEM216Q9P0N5 145 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 CPSF2Q9P2I0 782 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 PATJQ8NI35 1801 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 SZT2Q5T011 3432 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 PHGDHO43175 533 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 SEC24AO95486 1093 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 ACRP10323 421 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 HSPA8P11142 646 aaKnown RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 HOXC13P31276 330 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 WNT3AP56704 352 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 POLD3Q15054 466 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TRIP4Q15650 581 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 USP41Q3LFD5 358 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TAF1BQ53T94 588 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-201ENST00000279247 RNF43Q68DV7 783 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 MSANTD2Q6P1R3 559 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 DENND1CQ8IV53 801 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 SPATA6LQ8N4H0 392 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TSGA13Q96PP4 275 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 IL12RB2Q99665 862 aa18.23■□□□□ 0.51
CAPN1-201ENST00000279247 TSPAN3O60637 253 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 RAMP2O60895 175 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 ANXA9O76027 345 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 PRKCGP05129 697 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 PIRTP0C851 137 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 RPS24P62847 133 aaKnown RBP18.22■□□□□ 0.51
CAPN1-201ENST00000279247 MPP1Q00013 466 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 PLD1Q13393 1074 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 ZNF460Q14592 562 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 NADSYN1Q6IA69 706 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 AGR3Q8TD06 166 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 APBB2Q92870 758 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 CPNE1Q99829 537 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 TMEM120AQ9BXJ8 343 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 HEY2Q9UBP5 337 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 CEP290O15078 2479 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 A0A0D9SEW6 157 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 CRHR1P34998 444 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 CCNFP41002 786 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 GLRBP48167 497 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 NPY2RP49146 381 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 ARFIP2P53365 341 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 TIGD7Q6NT04 549 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-201ENST00000279247 EXOC2Q96KP1 924 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 FCRL5Q96RD9 977 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 SOX13Q9UN79 622 aa18.22■□□□□ 0.51
CAPN1-201ENST00000279247 SLC4A1P02730 911 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 MYL2P10916 166 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 RHOQP17081 205 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 IKBKEQ14164 716 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 LINC00523Q86TU6 105 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 MRGPRX2Q96LB1 330 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 RBBP8Q99708 897 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 EMCNQ9ULC0 261 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 SERPINB3P29508 390 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 SPRP35270 261 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-201ENST00000279247 DEFB103AP81534 67 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 BNIP1Q12981 228 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 TTC7BQ86TV6 843 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 OR7D4Q8NG98 312 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 VPS39Q96JC1 886 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 CLIC5Q9NZA1 410 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 ZFP69BQ9UJL9 534 aa18.21■□□□□ 0.51
CAPN1-201ENST00000279247 GEMP55040 296 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 GRM3Q14832 879 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 C16orf59Q7L2K0 433 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 IGSF21Q96ID5 467 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 C1orf74Q96LT6 269 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 PLCD4Q9BRC7 762 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 ARMCX1Q9P291 453 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 XIRP2A4UGR9 3374 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 A0A096LPK6 155 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 BPGMP07738 259 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 SLC6A4P31645 630 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 ATP5C1P36542 298 aaKnown RBP18.2■□□□□ 0.5
CAPN1-201ENST00000279247 CBLBQ13191 982 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 ANO4Q32M45 955 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 IL31Q6EBC2 164 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 DENND5AQ6IQ26 1287 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 C10orf107Q8IVU9 208 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 CRIPAKQ8N1N5 446 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 NSMCE1Q8WV22 266 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 TMEM169Q96HH4 297 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 CLSTN3Q9BQT9 956 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms