RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 BNIP3Q12983 259 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 PITRM1Q5JRX3 1037 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 NAA35Q5VZE5 725 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 CXorf57Q6NSI4 855 aaKnown RBP12.64□□□□□ -0.39
MRPS28-201ENST00000276585 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 USP53Q70EK8 1073 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 C14orf80Q86SX3 495 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 ZDHHC17Q8IUH5 632 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 ZNF683Q8IZ20 524 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 CARNMT1Q8N4J0 409 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 OR2T3Q8NH03 318 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
MRPS28-201ENST00000276585 PCDHB18PQ96TA0 734 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 TBCBQ99426 244 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 DDX50Q9BQ39 737 aaKnown RBP12.64□□□□□ -0.39
MRPS28-201ENST00000276585 PRSS16Q9NQE7 514 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 AASDHPPTQ9NRN7 309 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 COX16Q9P0S2 106 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 TMEM59LQ9UK28 342 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 CEP83Q9Y592 693 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 HS3ST4Q9Y661 456 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 ITPR3Q14573 2671 aa12.64□□□□□ -0.39
MRPS28-201ENST00000276585 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 M0QYT0 321 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 ADCY5O95622 1261 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CCR1P32246 355 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CXCR3P49682 368 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CDH18Q13634 790 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 IGFBP7Q16270 282 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 C5orf22Q49AR2 442 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
MRPS28-201ENST00000276585 RAB6CQ53S08 254 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 C3orf38Q5JPI3 329 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 FKBP15Q5T1M5 1219 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 FAM102AQ5T9C2 384 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 ZNF677Q86XU0 584 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 APCDD1Q8J025 514 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
MRPS28-201ENST00000276585 ATP6V0D2Q8N8Y2 350 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 CPA5Q8WXQ8 436 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 C18orf8Q96DM3 657 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 ALG14Q96F25 216 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 PGAP3Q96FM1 320 aaPredicted RBP12.63□□□□□ -0.39
MRPS28-201ENST00000276585 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 RAB6CQ9H0N0 254 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 SYNCQ9H7C4 482 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 TMPRSS4Q9NRS4 437 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 ARHGEF38Q9NXL2 777 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.39
MRPS28-201ENST00000276585 DAAM1Q9Y4D1 1078 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 SNX10Q9Y5X0 201 aa12.63□□□□□ -0.39
MRPS28-201ENST00000276585 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 ITPR2Q14571 2701 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 ICE1Q9Y2F5 2266 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 FAM47DPA6NHR8 397 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 F5H5T6 163 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 TEX33O43247 280 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 PAGE1O75459 146 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 WNT1P04628 370 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 SLC2A3P11169 496 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
MRPS28-201ENST00000276585 POLR2EP19388 210 aaKnown RBP12.62□□□□□ -0.39
MRPS28-201ENST00000276585 MMP8P22894 467 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 MZF1P28698 734 aaPredicted RBP12.62□□□□□ -0.39
MRPS28-201ENST00000276585 SULT1E1P49888 294 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 UBXN1Q04323 297 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 NME3Q13232 169 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 CLN3Q13286 438 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 AUHQ13825 339 aaKnown RBP12.62□□□□□ -0.39
MRPS28-201ENST00000276585 PROX2Q3B8N5 592 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 KIAA0895LQ68EN5 471 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
MRPS28-201ENST00000276585 ZNF557Q8N988 423 aaPredicted RBP12.62□□□□□ -0.39
MRPS28-201ENST00000276585 SEMA3CQ99985 751 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 ORAI3Q9BRQ5 295 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 SYT11Q9BT88 431 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 VANGL2Q9ULK5 521 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 SATB2Q9UPW6 733 aa12.62□□□□□ -0.39
MRPS28-201ENST00000276585 A0A1B0GVM2 712 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 A0A1W2PPC4 97 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 TYW5A2RUC4 315 aaKnown RBP12.61□□□□□ -0.39
MRPS28-201ENST00000276585 TCAF2A6NFQ2 919 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 GJB6O95452 261 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 DNTTP04053 509 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 ASLP04424 464 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 ITGB2P05107 769 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 ATP5BP06576 529 aaKnown RBP12.61□□□□□ -0.39
MRPS28-201ENST00000276585 PDGFRAP16234 1089 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 CD38P28907 300 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 STAT1P42224 750 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 NUMBP49757 651 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 STK19P49842 368 aaPredicted RBP12.61□□□□□ -0.39
MRPS28-201ENST00000276585 SNX16P57768 344 aa12.61□□□□□ -0.39
MRPS28-201ENST00000276585 RNASE9P60153 205 aaKnown RBP12.61□□□□□ -0.39
MRPS28-201ENST00000276585 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms