RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 OR1E1P30953 314 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 ANKRD20A4Q4UJ75 823 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 SPATA22Q8NHS9 363 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 PLD4Q96BZ4 506 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 RMDN2Q96LZ7 410 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 YME1L1Q96TA2 773 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 SP110Q9HB58 689 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 MRPL17Q9NRX2 175 aaKnown RBP15.57■□□□□ 0.08
SF3B4-201ENST00000271628 MKS1Q9NXB0 559 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 UXTQ9UBK9 157 aaPredicted RBP15.57■□□□□ 0.08
SF3B4-201ENST00000271628 SOX13Q9UN79 622 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 YIPF1Q9Y548 306 aa15.57■□□□□ 0.08
SF3B4-201ENST00000271628 ATP9BO43861 1147 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 RFPL1O75677 317 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 NEK3P51956 506 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 KCNJ2P63252 427 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 CREMQ03060 361 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 IL10RBQ08334 325 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 MPP3Q13368 585 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 CERCAMQ5T4B2 595 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 MROH9Q5TGP6 573 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 ARMC3Q5W041 872 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 PACS1Q6VY07 963 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 ZNF354CQ86Y25 554 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 ZNF669Q96BR6 464 aaPredicted RBP15.56■□□□□ 0.08
SF3B4-201ENST00000271628 HMCESQ96FZ2 354 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 SLC25A51Q9H1U9 297 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 ZNF212Q9UDV6 495 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 SSX2IPQ9Y2D8 614 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 COCHO43405 550 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 UGT1A9O60656 530 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 UNC5CO95185 931 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 PEX11BO96011 259 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 MT-CYBP00156 380 aaPredicted RBP15.56■□□□□ 0.08
SF3B4-201ENST00000271628 CCNFP41002 786 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 KCNQ1P51787 676 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 TNK2Q07912 1038 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 SETDB1Q15047 1291 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 PCID2Q5JVF3 399 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 GRTP1Q5TC63 336 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 NADSYN1Q6IA69 706 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 POTEHQ6S545 545 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 TMCO2Q7Z6W1 182 aaPredicted RBP15.56■□□□□ 0.08
SF3B4-201ENST00000271628 TCEAL8Q8IYN2 117 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 UNC5BQ8IZJ1 945 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 TEX26Q8N6G2 289 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 GIMAP7Q8NHV1 300 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 ACMSDQ8TDX5 336 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 CPNE1Q99829 537 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 FSD1LQ9BXM9 530 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 UGT1A7Q9HAW7 530 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 UGT1A10Q9HAW8 530 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 UGT1A8Q9HAW9 530 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 VPS45Q9NRW7 570 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 PHTF1Q9UMS5 762 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 PCDHB12Q9Y5F1 795 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 USH1CQ9Y6N9 552 aa15.56■□□□□ 0.08
SF3B4-201ENST00000271628 ZCWPW2A0A1B0GU75 182 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 PRRG1O14668 218 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ADRA1DP25100 572 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ALDH3A1P30838 453 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 GP5P40197 560 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 EPHB3P54753 998 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 SERINC3Q13530 473 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 RABGAP1LQ5R372 815 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 RASSF3Q86WH2 238 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 IPMKQ8NFU5 416 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 PTCD2Q8WV60 388 aaKnown RBP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ZNF419Q96HQ0 510 aaPredicted RBP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 FCRL3Q96P31 734 aaPredicted RBP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 APOL2Q9BQE5 337 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 KIFC1Q9BW19 673 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 TXLNGQ9NUQ3 528 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 GRID1Q9ULK0 1009 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 HMX2A2RU54 273 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 J3KR12 359 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 GJB5O95377 273 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ERVK-10P10266 1014 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ADRA1AP35348 466 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ETV4P43268 484 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 BMPR2Q13873 1038 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 E2F5Q15329 346 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 CES3Q6UWW8 571 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 LGI2Q8N0V4 545 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 ATP2A3Q93084 1043 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 PSMG2Q969U7 264 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 PABPC5Q96DU9 382 aaKnown RBP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 SRPK1Q96SB4 655 aaKnown RBP15.55■□□□□ 0.08
SF3B4-201ENST00000271628 EBF2Q9HAK2 575 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 CHRAC1Q9NRG0 131 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 NSMCE4AQ9NXX6 385 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 SLC17A7Q9P2U7 560 aa15.55■□□□□ 0.08
SF3B4-201ENST00000271628 EDF1O60869 148 aaKnown RBP15.54■□□□□ 0.08
SF3B4-201ENST00000271628 DCTN3O75935 186 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 KRT16P08779 473 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 DHRS4L1P0CG22 281 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 TPH1P17752 444 aa15.54■□□□□ 0.08
SF3B4-201ENST00000271628 CCND1P24385 295 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms