RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 HARS2P49590 506 aaKnown RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 PGFP49763 221 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 SLC5A3P53794 718 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 TSPY1Q01534 308 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 GRIK3Q13003 919 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 USP4Q13107 963 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 MUM1Q2TAK8 710 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 RAPH1Q70E73 1250 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 CLEC14AQ86T13 490 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ULK2Q8IYT8 1036 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ANKRD27Q96NW4 1050 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 TSGA13Q96PP4 275 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ADAM2Q99965 735 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 SPC25Q9HBM1 224 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ARHGEF38Q9NXL2 777 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 SIN3BO75182 1162 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 PAGE1O75459 146 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 TM7SF2O76062 418 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 MOCS2O96007 188 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 OR4Q2P0C623 313 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 AVPR1AP37288 418 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 CDK7P50613 346 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 RAB27AP51159 221 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 TUSC3Q13454 348 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 LPIN1Q14693 890 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 POU6F1Q14863 301 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 TSNAXIP1Q2TAA8 658 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 PDPK2PQ6A1A2 396 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ZNF781Q8N8C0 355 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 MAB21L3Q8N8X9 362 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 AGR3Q8TD06 166 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 CASP10Q92851 521 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 NMRK1Q9NWW6 199 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 DSEQ9UL01 958 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 LRRC42Q9Y546 428 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 M0QZQ0 153 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 ZNF195O14628 629 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 NVLO15381 856 aaKnown RBP13.1□□□□□ -0.31
CPSF6-201ENST00000266679 PHGDHO43175 533 aaKnown RBP13.1□□□□□ -0.31
CPSF6-201ENST00000266679 PSMD3O43242 534 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 KLHL2O95198 593 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 ALOX15P16050 662 aaPredicted RBP13.1□□□□□ -0.31
CPSF6-201ENST00000266679 CYP2C18P33260 490 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 GRIK1P39086 918 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 VHLP40337 213 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 DSC3Q14574 896 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 ANO4Q32M45 955 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 RIPOR1Q6ZS17 1223 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 LINC00523Q86TU6 105 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 SLC41A1Q8IVJ1 513 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 SHKBP1Q8TBC3 707 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 TRIM62Q9BVG3 475 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 SLC39A8Q9C0K1 460 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
CPSF6-201ENST00000266679 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 NMRAL1Q9HBL8 299 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 GLOD4Q9HC38 313 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
CPSF6-201ENST00000266679 WASF2Q9Y6W5 498 aa13.1□□□□□ -0.31
CPSF6-201ENST00000266679 MIA3Q5JRA6 1907 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 ZNF623O75123 536 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 TBX10O75333 385 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 NCF2P19878 526 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CCNCP24863 283 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 ABL2P42684 1182 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 MPP1Q00013 466 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SLC25A3Q00325 362 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SLC34A1Q06495 639 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CFAP157Q5JU67 520 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 BRMS1LQ5PSV4 323 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 NET1Q7Z628 596 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SCML4Q8N228 414 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CFAP61Q8NHU2 1237 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 DNAJC9Q8WXX5 260 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 MOCOSQ96EN8 888 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SCYL1Q96KG9 808 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 FCRL2Q96LA5 508 aaPredicted RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 PANX3Q96QZ0 392 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 GPR22Q99680 433 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 MCMBPQ9BTE3 642 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 KIFC1Q9BW19 673 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CDH19Q9H159 772 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 FAM96AQ9H5X1 160 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 GEMIN8Q9NWZ8 242 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms