RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PTPRN2Q92932 1015 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 QKIQ96PU8 341 aaKnown RBP eCLIP14.54□□□□□ -0.08
SSBP1-201ENST00000265304 ACOX2Q99424 681 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 NAP1L3Q99457 506 aaPredicted RBP14.54□□□□□ -0.08
SSBP1-201ENST00000265304 LGMNQ99538 433 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 FBRSQ9HAH7 460 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 USP29Q9HBJ7 922 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 RBM12Q9NTZ6 932 aaKnown RBP14.54□□□□□ -0.08
SSBP1-201ENST00000265304 SLC25A13Q9UJS0 675 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 DRG1Q9Y295 367 aaKnown RBP14.54□□□□□ -0.08
SSBP1-201ENST00000265304 STON1Q9Y6Q2 735 aa14.54□□□□□ -0.08
SSBP1-201ENST00000265304 FANCMQ8IYD8 2048 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 A0A1W2PQF6 199 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 WASH3PC4AMC7 463 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 DFFAO00273 331 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 PI15O43692 258 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 CR2P20023 1033 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 CASQ1P31415 396 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 HSPA9P38646 679 aaKnown RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 NNMTP40261 264 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 STK19P49842 368 aaPredicted RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 DNA2P51530 1060 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 RENBPP51606 427 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 DYNLT1P63172 113 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 LLGL1Q15334 1064 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 DLG2Q15700 870 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 RALGPS1Q5JS13 557 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 EOGTQ5NDL2 527 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 C9orf64Q5T6V5 341 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 CCDC13Q8IYE1 715 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 C12orf50Q8NA57 414 aaPredicted RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 CYB5D2Q8WUJ1 264 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 RTP4Q96DX8 246 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 ZNF419Q96HQ0 510 aaPredicted RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 RPL10LQ96L21 214 aaKnown RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 VAT1Q99536 393 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 UBA2Q9UBT2 640 aaPredicted RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
SSBP1-201ENST00000265304 SPAG17Q6Q759 2223 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 EML5Q05BV3 1969 aa14.53□□□□□ -0.08
SSBP1-201ENST00000265304 EDDM13A0A1B0GTR0 161 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 K7ERQ8 282 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 SGK1O00141 431 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 PGRMC1O00264 195 aaKnown RBP14.52□□□□□ -0.09
SSBP1-201ENST00000265304 ALOX15BO15296 676 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 TMCC1O94876 653 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 GSRP00390 522 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 RBP3P10745 1247 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 CCNB1P14635 433 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 STIP1P31948 543 aaKnown RBP14.52□□□□□ -0.09
SSBP1-201ENST00000265304 TIE1P35590 1138 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 NUBP1P53384 320 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 ST8SIA6P61647 398 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 SLC10A7Q0GE19 358 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 WASHC5Q12768 1159 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 TUBB2AQ13885 445 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 LBRQ14739 615 aaKnown RBP14.52□□□□□ -0.09
SSBP1-201ENST00000265304 CRY1Q16526 586 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 C2orf27AQ580R0 203 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 PKN3Q6P5Z2 889 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 Q6ZS52 159 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 ZNF572Q7Z3I7 529 aaPredicted RBP14.52□□□□□ -0.09
SSBP1-201ENST00000265304 KLHDC8BQ8IXV7 354 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 CHPFQ8IZ52 775 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 ALLCQ8N6M5 410 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 CNTD1Q8N815 330 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 PRELID2Q8N945 189 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 NETO2Q8NC67 525 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 OR2A12Q8NGT7 310 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 RPLP0P6Q8NHW5 317 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 TFB1MQ8WVM0 346 aaKnown RBP14.52□□□□□ -0.09
SSBP1-201ENST00000265304 C16orf45Q96MC5 204 aaPredicted RBP14.52□□□□□ -0.09
SSBP1-201ENST00000265304 FAM129BQ96TA1 746 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 TUBB2BQ9BVA1 445 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 SP110Q9HB58 689 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 LHX3Q9UBR4 397 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 SEPT3Q9UH03 358 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 ATP8A1Q9Y2Q0 1164 aa14.52□□□□□ -0.09
SSBP1-201ENST00000265304 NUMA1Q14980 2115 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 CFAP69A5D8W1 941 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 TTC34A8MYJ7 566 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 MCF2LO15068 1137 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 ZNF185O15231 689 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 LIASO43766 372 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 KLF8O95600 359 aaPredicted RBP14.51□□□□□ -0.09
SSBP1-201ENST00000265304 ITGAVP06756 1048 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 CES1P23141 567 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 PRKCHP24723 683 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 DGKEP52429 567 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 EIF3EP60228 445 aaKnown RBP14.51□□□□□ -0.09
SSBP1-201ENST00000265304 SLC14A2Q15849 920 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 TEX44Q53QW1 395 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 MARC1Q5VT66 337 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 SDE2Q6IQ49 451 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 C22orf39Q6P5X5 142 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 SERPINA13PQ6UXR4 307 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 LINGO4Q6UY18 593 aa14.51□□□□□ -0.09
SSBP1-201ENST00000265304 ATP11CQ8NB49 1132 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms