RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 IL31RAQ8NI17 732 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 HERPUD2Q9BSE4 406 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 CCDC154A6NI56 674 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 FBP2O00757 339 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 KLF11O14901 512 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 SPTLC1O15269 473 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 IL1R1P14778 569 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 ALDH4A1P30038 563 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 MPZL3Q6UWV2 235 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 CENPSQ8N2Z9 138 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 APPL2Q8NEU8 664 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 PRMT6Q96LA8 375 aaPredicted RBP15.28■□□□□ 0.04
CASC3-201ENST00000264645 CITED4Q96RK1 184 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 CPXM1Q96SM3 734 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 PRDM12Q9H4Q4 367 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 DPP3Q9NY33 737 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
CASC3-201ENST00000264645 GOLGA4Q13439 2230 aaKnown RBP15.27■□□□□ 0.04
CASC3-201ENST00000264645 MON2Q7Z3U7 1717 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 MRC1P22897 1456 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 TBKBP1A7MCY6 615 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 EVPLLA8MZ36 301 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 TK2O00142 265 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 CCNKO75909 580 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 IL12RB1P42701 662 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 CDH13P55290 713 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 ARPP19P56211 112 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 SIX1Q15475 284 aaPredicted RBP15.27■□□□□ 0.04
CASC3-201ENST00000264645 ZBED5Q49AG3 693 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 EFCAB12Q6NXP0 572 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 SLC22A9Q8IVM8 553 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 PLD5Q8N7P1 536 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 OR2T34Q8NGX1 318 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 OR2T3Q8NH03 318 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 TBC1D13Q9NVG8 400 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 NOD1Q9Y239 953 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 PCDHB12Q9Y5F1 795 aa15.27■□□□□ 0.04
CASC3-201ENST00000264645 CHRNGP07510 517 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 TNFSF9P41273 254 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 CLCN3P51790 818 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 SLC18A2Q05940 514 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 CTBP1Q13363 440 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 DLG2Q15700 870 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 ZNF829Q3KNS6 432 aaPredicted RBP15.27■□□□□ 0.03
CASC3-201ENST00000264645 FNDC5Q8NAU1 212 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 SEPT8Q92599 483 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 ANKRD6Q9Y2G4 727 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 AAR2Q9Y312 384 aaKnown RBP15.27■□□□□ 0.03
CASC3-201ENST00000264645 KCNH1O95259 989 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 SUPT20HL2P0C7V6 817 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 IL12AP29459 219 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 HALP42357 657 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 RAB15P59190 212 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 TNK2Q07912 1038 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 ZNF235Q14590 738 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 SUPT20HL1Q3ZLR7 823 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 ARHGAP36Q6ZRI8 547 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 LPAR1Q92633 364 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 ZNF556Q9HAH1 456 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 HOXC10Q9NYD6 342 aa15.27■□□□□ 0.03
CASC3-201ENST00000264645 DNAJA2O60884 412 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 ATP5F1P24539 256 aaPredicted RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 NR6A1Q15406 480 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 ZC3H12BQ5HYM0 836 aaKnown RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 FLCNQ8NFG4 579 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 BLOC1S5Q8TDH9 187 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 NUAK2Q9H093 628 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 ARIH1Q9Y4X5 557 aaPredicted RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 TNFRSF21O75509 655 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 SOAT2O75908 522 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 ATG7O95352 703 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 STAG3L1P0CL83 205 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 CHRM3P20309 590 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 CSTF3Q12996 717 aaKnown RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 PGM5Q15124 567 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 INSCQ1MX18 579 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 TWF2Q6IBS0 349 aaKnown RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 FAM183BPQ6ZVS7 135 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 EFL1Q7Z2Z2 1120 aaKnown RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 SVOPQ8N4V2 548 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 MCFD2Q8NI22 146 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 MKL1Q969V6 931 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 AZIN2Q96A70 460 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 VPS33AQ96AX1 596 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 UNC93B1Q9H1C4 597 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 TLE6Q9H808 572 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 SMPD3Q9NY59 655 aaPredicted RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 A0A087WZ62 844 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 BNIP3LO60238 219 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 SYNCRIPO60506 623 aaKnown RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 CST3P01034 146 aaPredicted RBP15.26■□□□□ 0.03
CASC3-201ENST00000264645 PRDX6P30041 224 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 CCNIQ14094 377 aa15.26■□□□□ 0.03
CASC3-201ENST00000264645 RELL1Q8IUW5 271 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms