RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 STMN1P16949 149 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 PMLP29590 882 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 RENBPP51606 427 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 COPAP53621 1224 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 ABCE1P61221 599 aaKnown RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 CYS1Q717R9 158 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 CMC1Q7Z7K0 106 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 MIB1Q86YT6 1006 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 HDAC11Q96DB2 347 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 NMUR2Q9GZQ4 415 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 IL1RAPL1Q9NZN1 696 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 ANKRD6Q9Y2G4 727 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 GIPC1O14908 333 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 PFDN6O15212 129 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 ATP1A4Q13733 1029 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 RAB44Q7Z6P3 723 aaPredicted RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 SCUBE1Q8IWY4 988 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 RHOBTB2Q9BYZ6 727 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 PREBQ9HCU5 417 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 PAGE1O75459 146 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 PGM3O95394 542 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 AVPR1AP37288 418 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 CXCR3P49682 368 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 C16orf72Q14CZ0 275 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 ARHGEF6Q15052 776 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 LRRC49Q8IUZ0 686 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 CCDC117Q8IWD4 279 aaPredicted RBP16.53■□□□□ 0.24
CTCF-201ENST00000264010 PDZD8Q8NEN9 1154 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 TEKT5Q96M29 485 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 RPRD1AQ96P16 312 aaPredicted RBP16.53■□□□□ 0.24
CTCF-201ENST00000264010 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 PIDD1Q9HB75 910 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 C2orf71A6NGG8 1288 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 SEC24DO94855 1032 aaPredicted RBP16.53■□□□□ 0.24
CTCF-201ENST00000264010 KRT75O95678 551 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 GALK1P51570 392 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 ART3Q13508 389 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 ZNF280DQ6N043 979 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 IZUMO2Q6UXV1 221 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 AGMOQ6ZNB7 445 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 HEATR4Q86WZ0 1026 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 C10orf107Q8IVU9 208 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 GALNT4Q8N4A0 578 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 WDR83Q9BRX9 315 aaKnown RBP16.53■□□□□ 0.24
CTCF-201ENST00000264010 NT5MQ9NPB1 228 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 MOCS1Q9NZB8 636 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 NEMP1O14524 444 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
CTCF-201ENST00000264010 HTR7P34969 479 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 GLRBP48167 497 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 DPYSQ14117 519 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 MARC1Q5VT66 337 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 C17orf99Q6UX52 265 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 CCDC80Q76M96 950 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 SPON2Q9BUD6 331 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 STN1Q9H668 368 aaKnown RBP16.53■□□□□ 0.24
CTCF-201ENST00000264010 GLOD4Q9HC38 313 aa16.53■□□□□ 0.24
CTCF-201ENST00000264010 ARHGAP10A1A4S6 786 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 DCLK1O15075 740 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 EEF1DP29692 281 aaKnown RBP16.52■□□□□ 0.24
CTCF-201ENST00000264010 CCNFP41002 786 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 SLC5A3P53794 718 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 SLC12A1Q13621 1099 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 CDHR3Q6ZTQ4 885 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 TFAP2DQ7Z6R9 452 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 ANKRD27Q96NW4 1050 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 RBBP8Q99708 897 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 MKS1Q9NXB0 559 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 NME7Q9Y5B8 376 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 A0A0U1RQF3 1178 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 LOC100653049A0A140TA62 436 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 C9IYK1 514 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 GABBR2O75899 941 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 KRT34O76011 436 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 CCNCP24863 283 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 CD151P48509 253 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 LIMK2P53671 638 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 PRKAA2P54646 552 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 SCAPQ12770 1279 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 TBL3Q12788 808 aaKnown RBP16.52■□□□□ 0.24
CTCF-201ENST00000264010 ITGA7Q13683 1181 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 SERINC5Q86VE9 423 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 MFSD3Q96ES6 412 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 PGLYRP2Q96PD5 576 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 CHRAC1Q9NRG0 131 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 MIOSQ9NXC5 875 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 PCDHB7Q9Y5E2 793 aa16.52■□□□□ 0.24
CTCF-201ENST00000264010 FAM72CH0Y354 149 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 LYPLA1O75608 230 aaPredicted RBP16.52■□□□□ 0.23
CTCF-201ENST00000264010 DDHD2O94830 711 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 TYMPP19971 482 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 PPM1JQ5JR12 505 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 FAM72AQ5TYM5 149 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 STEAP4Q687X5 459 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 FAM72DQ6L9T8 149 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms