RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 DPY19L3Q6ZPD9 716 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
USE1-201ENST00000263897 CHST14Q8NCH0 376 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 ARHGEF2Q92974 986 aaKnown RBP16.42■□□□□ 0.22
USE1-201ENST00000263897 SKA1Q96BD8 255 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 TBC1D31Q96DN5 1066 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 SLC6A18Q96N87 628 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CEP44Q9C0F1 390 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 MAGEH1Q9H213 219 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 TNKS2Q9H2K2 1166 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 HAUS4Q9H6D7 363 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CBX8Q9HC52 389 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 ARHGAP20Q9P2F6 1191 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 DNAI1Q9UI46 699 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 NEU3Q9UQ49 428 aa16.42■□□□□ 0.22
USE1-201ENST00000263897 CACNA1BQ00975 2339 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 A0A1W2PR77 199 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 H0Y8X5 98 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 KPNA3O00505 521 aaPredicted RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 DFNA5O60443 496 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 CD160O95971 181 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 TOP3BO95985 862 aaKnown RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 PRNPP04156 253 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 GZMAP12544 262 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 ACVRL1P37023 503 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 PRKCIP41743 596 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 RECQLP46063 649 aaPredicted RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 SERPINH1P50454 418 aaKnown RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 TAS2R38P59533 333 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 PPP2CBP62714 309 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 PPP2CAP67775 309 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 CCDC15Q0P6D6 951 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 MAMLD1Q13495 774 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 ZNF423Q2M1K9 1284 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 ARSIQ5FYB1 569 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 E4F1Q66K89 784 aaPredicted RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 ZNF571Q7Z3V5 609 aaPredicted RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 PYROXD2Q8N2H3 581 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 PCDH20Q8N6Y1 951 aaKnown RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 SETD7Q8WTS6 366 aaKnown RBP16.41■□□□□ 0.22
USE1-201ENST00000263897 ARRDC3Q96B67 414 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 SERAC1Q96JX3 654 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 TTYH3Q9C0H2 523 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 AASDHPPTQ9NRN7 309 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 PCOLCE2Q9UKZ9 415 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 FZD10Q9ULW2 581 aa16.41■□□□□ 0.22
USE1-201ENST00000263897 RNF103O00237 685 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 FLRT2O43155 660 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 NUDT1P36639 197 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 AIF1P55008 147 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 OGDHQ02218 1023 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 CARD16Q5EG05 197 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 FIGNQ5HY92 759 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 EFHC2Q5JST6 749 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 PIP5KL1Q5T9C9 394 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 PLEKHA7Q6IQ23 1121 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 NEK5Q6P3R8 708 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 LUZP1Q86V48 1076 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 TRIM69Q86WT6 500 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 PLPP6Q8IY26 295 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 RHBDD1Q8TEB9 315 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 ISG20Q96AZ6 181 aaKnown RBP16.4■□□□□ 0.22
USE1-201ENST00000263897 HEPHQ9BQS7 1158 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 SCNM1Q9BWG6 230 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 PREBQ9HCU5 417 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 PARVAQ9NVD7 372 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 IL36AQ9UHA7 158 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 HPCAL4Q9UM19 191 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 DMTF1Q9Y222 760 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 ACTL7AQ9Y615 435 aa16.4■□□□□ 0.22
USE1-201ENST00000263897 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.21
USE1-201ENST00000263897 PCDHGA12O60330 932 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 RAMP2O60895 175 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 LEFTY1O75610 366 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 TRIM16O95361 564 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
USE1-201ENST00000263897 SPINK2P20155 84 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 EPHB2P29323 1055 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 MAT2AP31153 395 aaKnown RBP16.39■□□□□ 0.21
USE1-201ENST00000263897 DNA2P51530 1060 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 GEMIN4P57678 1058 aaKnown RBP16.39■□□□□ 0.21
USE1-201ENST00000263897 TPM4P67936 248 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 FANCCQ00597 558 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 KLHL30Q0D2K2 578 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
USE1-201ENST00000263897 SLC45A4Q5BKX6 768 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 NAPEPLDQ6IQ20 393 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 ERN2Q76MJ5 926 aaKnown RBP16.39■□□□□ 0.21
USE1-201ENST00000263897 TMC6Q7Z403 805 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 GLRX5Q86SX6 157 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 MFSD2AQ8NA29 543 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 HDAC8Q9BY41 377 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 DYRK4Q9NR20 520 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 FCF1Q9Y324 198 aaKnown RBP16.39■□□□□ 0.21
USE1-201ENST00000263897 WASF2Q9Y6W5 498 aa16.39■□□□□ 0.21
USE1-201ENST00000263897 A0A1B0GTQ1 180 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 TLR4O00206 839 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 KDELR3O43731 214 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms